RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FDCSPQ8NFU4 85 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 OR5P3Q8WZ94 311 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 OR2V2Q96R30 315 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 LRFN3Q9BTN0 628 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 HPRT1P00492 218 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 CSRP1P21291 193 aaKnown RBP9.96□□□□□ -0.82
PTCH1-208ENST00000430669 LHX2P50458 406 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 FAM90A1Q86YD7 464 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 RXFP4Q8TDU9 374 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
PTCH1-208ENST00000430669 IGFBP3P17936 291 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-208ENST00000430669 UBE2V2Q15819 145 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 TMEM123Q8N131 208 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 MMP24Q9Y5R2 645 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 SEC11BP0C7V7 166 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 CCL1P22362 96 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 AESQ08117 197 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 TIMM9Q9Y5J7 89 aa9.96□□□□□ -0.82
PTCH1-208ENST00000430669 HPXP02790 462 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 BAGE3Q86Y29 109 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 BAGE2Q86Y30 109 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 DOLPP1Q86YN1 238 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 SHISA5Q8N114 240 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 C20orf24Q9BUV8 137 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 PDE6DO43924 150 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 MPDU1O75352 247 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF737O75373 536 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 MELTFP08582 738 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ARL16Q0P5N6 197 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 RPL7L1Q6DKI1 246 aaKnown RBP9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF429Q86V71 674 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 TIMP4Q99727 224 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 CHST1O43916 411 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 SERF2P84101 59 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF596Q8TC21 504 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF714Q96N38 554 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 WSB1Q9Y6I7 421 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 OR2H2O95918 312 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 KLF14Q8TD94 323 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-208ENST00000430669 HES7Q9BYE0 225 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ADAP1O75689 374 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 F2RP25116 425 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
PTCH1-208ENST00000430669 FLYWCH2Q96CP2 140 aaKnown RBP9.95□□□□□ -0.82
PTCH1-208ENST00000430669 CDC34P49427 236 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-208ENST00000430669 KHDC3LQ587J8 217 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 MRGPRFQ96AM1 343 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 SLC35D1Q9NTN3 355 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 GPR132Q9UNW8 380 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 LIPGQ9Y5X9 500 aa9.95□□□□□ -0.82
PTCH1-208ENST00000430669 RPL31P62899 125 aaKnown RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 MSL2Q9HCI7 577 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 RBFOX3A6NFN3 312 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 VSIG10L2P0DP72 767 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 COMPP49747 757 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 SUCLG1P53597 346 aaKnown RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 ERVFRD-1P60508 538 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 DHRS7BQ6IAN0 325 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 FBLN5Q9UBX5 448 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 CPAMD8Q8IZJ3 1885 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 HABP2Q14520 560 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 ACY3Q96HD9 319 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 LURAP1Q96LR2 239 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 CCL28Q9NRJ3 127 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 LEUTXA8MZ59 168 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 POLR2GP62487 172 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 PMP22Q01453 160 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 SLC35E4Q6ICL7 350 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 SIGLEC12Q96PQ1 595 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 GAB2Q9UQC2 676 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 DOPEY2Q9Y3R5 2298 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 PPIAL4EA0A075B759 164 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 PPIAL4DF5H284 164 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 MFNGO00587 321 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 PPIAL4FP0DN26 164 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 SPP1P10451 314 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 PPIAL4AQ9Y536 164 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 SS18L1O75177 396 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 AKR1C3P42330 323 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 TMEM230Q96A57 120 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 MISP3Q96FF7 219 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 OPN3Q9H1Y3 402 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-208ENST00000430669 HEXA-AS1Q9H8Q6 139 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 URGCP-MRPS24S4R325 110 aa9.94□□□□□ -0.82
PTCH1-208ENST00000430669 YIF1AO95070 293 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 MC5RP33032 325 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 P2RX3P56373 397 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 GINS3Q9BRX5 216 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 AQP10Q96PS8 301 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 hCG_38984A0A1B0GV85 526 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 HBZP02008 142 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR4A8P0C604 315 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms