RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TREM2Q9NZC2 230 aa7.44□□□□□ -1.22
GABPB1-205ENST00000429662 RP1L1Q8IWN7 2480 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 IGSF23A1L1A6 192 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 FAM221AA4D161 298 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SLC22A20A6NK97 555 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ANKRD30BLA7E2S9 258 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 J3QW42 95 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 DEGS1O15121 323 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ADAM20O43506 726 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SS18L1O75177 396 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 OR2C1O95371 312 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 IGHV2-5P01817 119 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ACAA1P09110 424 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 OR8U8P0C7N1 319 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 PATE4P0C8F1 98 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 BCL3P20749 454 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 S100PP25815 95 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 APLNRP35414 380 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 HAAOP46952 286 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 NPBWR2P48146 333 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 TAS2R30P59541 319 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 POLR2GP62487 172 aaKnown RBP eCLIP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ARF1P84077 181 aaKnown RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 IGSF11Q5DX21 431 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SP5Q6BEB4 398 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF880Q6PDB4 577 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SLC35E3Q7Z769 313 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 GAPTQ8N292 157 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 OR56B2PQ8NGI1 322 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 FGFBP3Q8TAT2 258 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 TVP23CQ96ET8 276 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SIGLEC12Q96PQ1 595 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 CABLES2Q9BTV7 478 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SH3BGRL3Q9H299 93 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 P4HTMQ9NXG6 502 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 FBXO7Q9Y3I1 522 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 OR2W1Q9Y3N9 320 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 SPG11Q96JI7 2443 aa7.43□□□□□ -1.22
GABPB1-205ENST00000429662 MED13LQ71F56 2210 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SDK2Q58EX2 2172 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 A0A1W2PPH5 198 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 A6NLC8 198 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SSSCA1O60232 199 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PGLYRP1O75594 196 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 CNOT4O95628 575 aaKnown RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 RFPL3SP0C7P2 107 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 OR13C7P0DN81 318 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 F2RP25116 425 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 OTX2P32243 289 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PPP1CCP36873 323 aaKnown RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 DYNLT3P51808 116 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 HLA-DRB3P79483 266 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 TGIF1Q15583 401 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 TBR1Q16650 682 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF818PQ6ZRF7 136 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 Q8IYB0 196 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 H1FOOQ8IZA3 346 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 CPEB3Q8NE35 698 aaKnown RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 OR5C1Q8NGR4 320 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 OR13D1Q8NGV5 346 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 OR10J5Q8NHC4 309 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PSMF1Q92530 271 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 SLAMF9Q96A28 289 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 IP6K3Q96PC2 410 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PSMG3Q9BT73 122 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 DDA1Q9BW61 102 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 STRADBQ9C0K7 418 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 PARP12Q9H0J9 701 aaKnown RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF581Q9P0T4 197 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 WSB1Q9Y6I7 421 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 NAV3Q8IVL0 2385 aa7.42□□□□□ -1.22
GABPB1-205ENST00000429662 ZNF469Q96JG9 3925 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-205ENST00000429662 A0A0G2JMM0 328 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 A0A1W2PPB8 328 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 A0A1W2PRS3 328 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 RNF212BA8MTL3 300 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 KIR3DP1A8MWS1 328 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 TXNL1O43396 289 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 CHST1O43916 411 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 SERPINE2P07093 398 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 SCTP09683 121 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 TAGLN2P37802 199 aaKnown RBP7.41□□□□□ -1.22
GABPB1-205ENST00000429662 FHITP49789 147 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 GPM6AP51674 278 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 UBE2KP61086 200 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 GNG3P63215 75 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 SERF2P84101 59 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 Q0VFX4 171 aa7.41□□□□□ -1.22
GABPB1-205ENST00000429662 FABP9Q0Z7S8 132 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms