RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TNFP01375 233 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 IFNA5P01569 189 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 HLA-DRB1P01911 266 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 PSMB3P49720 205 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 TMEM50BP56557 158 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 PIGPP57054 158 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 ARFRP1Q13795 201 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF77Q15935 545 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF658BQ4V348 819 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 SLC48A1Q6P1K1 146 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 LSRQ86X29 649 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 LINC00346Q8IVM7 164 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 FAM58AQ8N1B3 248 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR5A1Q8NGJ0 315 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR2AE1Q8NHA4 323 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 SGMS2Q8NHU3 365 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 KCNG3Q8TAE7 436 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 CYB5D2Q8WUJ1 264 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR5P3Q8WZ94 311 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 AMELYQ99218 206 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPATA25Q9BR10 227 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPXQ9BT56 116 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 LMF2Q9BU23 707 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 LINC00470Q9BZP3 86 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 NPFFR1Q9GZQ6 430 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 COPS7AQ9UBW8 275 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 CACNA1CQ13936 2221 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A0A6YYD4 124 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A1W2PR80 420 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A1W2PS18 150 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 K7EP34 96 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 TMPRSS2O15393 492 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 RAD51DO75771 328 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 OMGP23515 440 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 NKX2-1P43699 371 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 GPM6AP51674 278 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 SRSF7Q16629 238 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 HLA-DRB5Q30154 266 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 HLA-BQ31612 363 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 LY6G5CQ5SRR4 150 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 KCTD18Q6PI47 426 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 TCF23Q7RTU1 214 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR2M3Q8NG83 312 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 MSI2Q96DH6 328 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 UBE2ZQ9H832 354 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 JPT1Q9UK76 154 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 TNFRSF18Q9Y5U5 241 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 MUC22E2RYF6 1773 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 NPIPA5E9PKD4 350 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 NPIPA3F8WFD2 350 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SLC33A1O00400 549 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SOCS1O15524 211 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 PDE6DO43924 150 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 CA2P00918 260 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 PPOXP50336 477 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ARF3P61204 181 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 HERV-K104P63124 156 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 NTHL1P78549 312 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ACKR1Q16570 336 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 LTC4SQ16873 150 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 KLHDC7BQ96G42 594 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ST6GALNAC5Q9BVH7 336 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 STRADBQ9C0K7 418 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 HIF1ANQ9NWT6 349 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 CD207Q9UJ71 328 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 NPIPA1Q9UND3 350 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 TLX3O43711 291 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 CLEC3AO75596 197 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SRD5A2P31213 254 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 MDH2P40926 338 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 PLAURQ03405 335 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 RAB30Q15771 203 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ABHD17CQ6PCB6 329 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF793Q6ZN11 406 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ODF3L1Q8IXM7 274 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR10G3Q8NGC4 313 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 RTN4IP1Q8WWV3 396 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPIN2AQ99865 258 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPIN2BQ9BPZ2 258 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 PHF7Q9BWX1 381 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 GNB4Q9HAV0 340 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF286AQ9HBT8 521 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 WNT6Q9Y6F9 365 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 SZT2Q5T011 3432 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 FANCMQ8IYD8 2048 aa7.6□□□□□ -1.19
CDC42BPA-206ENST00000429440 LOC107986453A0A1B0GWG9 222 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 C7orf71A4D174 169 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 PSMB11A5LHX3 300 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 F2Z2F3 143 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 TTRP02766 147 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 FTH1P19P0C7X4 201 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 SRFP11831 508 aa7.59□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF133P52736 654 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms