RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MFSD2BA6NFX1 497 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 IGHV2-70P01814 119 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 CHRM2P08172 466 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 NMBP08949 121 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 EFNA4P52798 201 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF788Q6ZQV5 615 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 CIARTQ8N365 385 aaPredicted RBP7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR52L2PQ8NGH6 319 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 SCARB1Q8WTV0 552 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC25A10Q9UBX3 287 aaPredicted RBP7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 CR1P17927 2039 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 K7N7A8 449 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 LGALS8O00214 317 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 ARPC5O15511 151 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 SCO1O75880 301 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 RAB3DO95716 219 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 KNG1P01042 644 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR4E1P0C645 316 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 RPA2P15927 270 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 CFHR2P36980 270 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 NPY4RP50391 375 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 FXYD4P59646 89 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 UBE2MP61081 183 aaKnown RBP7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 SRSF4Q08170 494 aaKnown RBP7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMEM17Q86X19 198 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 FAM219AQ8IW50 185 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 C12orf4Q9NQ89 552 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 RDH8Q9NYR8 311 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 RNF150Q9ULK6 438 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 NSD1Q96L73 2696 aaPredicted RBP7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 C22orf46C9J442 243 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 FAM157AC9JC47 383 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 C12orf77C9JDV5 145 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 NAPSAO96009 420 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 AMY2AP04746 511 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 ACAA1P09110 424 aaPredicted RBP7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZP3P21754 424 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 SPIN3Q5JUX0 258 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 LY6G6FQ5SQ64 297 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 TEX36Q5VZQ5 186 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF841Q6ZN19 808 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF497Q6ZNH5 498 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 Q8IYB0 196 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 TAF9BQ9HBM6 251 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 SDHAF2Q9NX18 166 aa7.87□□□□□ -1.15
HMGCLL1-206ENST00000428842 F8P00451 2351 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 FXYD6-FXYD2A0A087WZ82 144 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF736B4DX44 427 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 TNFRSF13BO14836 293 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 NFYBP25208 207 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 PPP1CCP36873 323 aaKnown RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 GPR6P46095 362 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 IL13RA1P78552 427 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 MPV17LQ2QL34 196 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 C4orf46Q504U0 113 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 GSG1LQ6UXU4 331 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 C12orf45Q8N5I9 185 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 CXorf58Q96LI9 332 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 ARL6Q9H0F7 186 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 FXYD6Q9H0Q3 95 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 CHODLQ9H9P2 273 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC2A8Q9NY64 477 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 EHFQ9NZC4 300 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 PCDHB10Q9UN67 800 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 TRAV14DV4A0A0A6YYC5 116 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 TRAV38-1A0A0B4J264 116 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 SIGLEC5O15389 551 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 TNFSF12O43508 249 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 IGKV1-13P0DP09 117 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 LMO1P25800 156 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 MZT1Q08AG7 82 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 IL13RA2Q14627 380 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 ATPAF1Q5TC12 328 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 PRAMEF5Q5TYX0 476 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 OVCH2Q7RTZ1 564 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 FAM185AQ8N0U4 392 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 PNKDQ8N490 385 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR13C8Q8NGS7 320 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR10Z1Q8NGY1 313 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 CLDND2Q8NHS1 167 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 TOMM40LQ969M1 308 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF665Q9H7R5 613 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 HSF4Q9ULV5 492 aa7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 SOX21Q9Y651 276 aaPredicted RBP7.86□□□□□ -1.15
HMGCLL1-206ENST00000428842 IGHV3OR16-10A0A075B7F0 116 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 ODAMA1E959 279 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 SERPINE3A8MV23 424 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC31A2O15432 143 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 GSTP1P09211 210 aaKnown RBP7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 MUC1P15941 1255 aaPredicted RBP7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 GNG10P50151 68 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 RPL31P62899 125 aaKnown RBP7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMEM200BQ69YZ2 307 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF660Q6AZW8 331 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms