RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 OR1L1Q8NH94 360 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 ZFP57Q9NU63 452 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 ZDHHC8Q9ULC8 765 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 SNAPINO95295 136 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 SLC34A2O95436 690 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 TSPAN15O95858 294 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 KRASP01116 189 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 OPN1MWP04001 364 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 TK1P04183 234 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 ACAA1P09110 424 aaPredicted RBP7.1□□□□□ -1.27
CD44-208ENST00000428726 OPN1MW2P0DN77 364 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 OPN1MW3P0DN78 364 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 FABP9Q0Z7S8 132 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 FOXC1Q12948 553 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 Q6ZR03 302 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 COLCA1Q6ZS62 124 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
CD44-208ENST00000428726 C3orf85A0A1B0GTC6 90 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 CRYM-AS1A6NIL9 109 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 NDUFA2O43678 99 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 LY86O95711 162 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 OR2H2O95918 312 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 COX5BP10606 129 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 PPP1CCP36873 323 aaKnown RBP7.09□□□□□ -1.27
CD44-208ENST00000428726 OR3A1P47881 315 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 IL15RAQ13261 267 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 MSMPQ1L6U9 139 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 CLEC12BQ2HXU8 276 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 AWAT1Q58HT5 328 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 CISD2Q8N5K1 135 aaKnown RBP7.09□□□□□ -1.27
CD44-208ENST00000428726 ZNRF1Q8ND25 227 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 PIEZO1Q92508 2521 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 AQP10Q96PS8 301 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 PRRX2Q99811 253 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 CNTNAP3Q9BZ76 1288 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 NAA60Q9H7X0 242 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 RNF122Q9H9V4 155 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 DLL3Q9NYJ7 618 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 RCC2Q9P258 522 aaKnown RBP7.09□□□□□ -1.27
CD44-208ENST00000428726 ZNF724A8MTY0 619 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 YIF1AO95070 293 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 TMEM50AO95807 157 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
CD44-208ENST00000428726 CEACAM6P40199 344 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 GLIPR1P48060 266 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 MEOX2P50222 304 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 EDDM3BP56851 147 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 TMEM187Q14656 261 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 OR8G1Q15617 311 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 HAGHQ16775 308 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 CEACAM21Q3KPI0 293 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 Q6ZRM9 215 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 KLF14Q8TD94 323 aaPredicted RBP7.09□□□□□ -1.27
CD44-208ENST00000428726 IGFBPL1Q8WX77 278 aa7.09□□□□□ -1.27
CD44-208ENST00000428726 PQLC2LA1A4F0 135 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 MPPED1O15442 326 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 HOXC12P31275 282 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 PMELP40967 661 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 KIR2DL2P43627 348 aaPredicted RBP7.09□□□□□ -1.28
CD44-208ENST00000428726 CAMLGP49069 296 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.28
CD44-208ENST00000428726 CCL20P78556 96 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 C4orf17Q53FE4 359 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 OR8G2PQ6IF36 304 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 SLC25A24Q6NUK1 477 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 ZNF343Q6P1L6 599 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 TMEM178AQ8NBL3 297 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 BCL2L2Q92843 193 aaPredicted RBP7.09□□□□□ -1.28
CD44-208ENST00000428726 BIN3Q9NQY0 253 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 MMP26Q9NRE1 261 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 NDRG3Q9UGV2 375 aa7.09□□□□□ -1.28
CD44-208ENST00000428726 FAM208BQ5VWN6 2430 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 CHST1O43916 411 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 RAMP3O60896 148 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 CD55P08174 381 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 METTL15P1P0C7V9 234 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
CD44-208ENST00000428726 RNPS1Q15287 305 aaKnown RBP7.08□□□□□ -1.28
CD44-208ENST00000428726 TBC1D28Q2M2D7 210 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 EIF2S3LQ2VIR3 472 aaKnown RBP7.08□□□□□ -1.28
CD44-208ENST00000428726 TMEM211Q6ICI0 200 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 DPPA2Q7Z7J5 298 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 ASCL3Q9NQ33 180 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 CELSR2Q9HCU4 2923 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 OR5H1A6NKK0 313 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 TAAR5O14804 337 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 MLNRO43193 412 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 FGF16O43320 207 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 CECR9P0C854 216 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 ARR3P36575 388 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 UCP2P55851 309 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 EIF5AP63241 154 aaKnown RBP7.08□□□□□ -1.28
CD44-208ENST00000428726 C9orf152Q5JTZ5 239 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 UQCC3Q6UW78 93 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 Q8NFD4 153 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 OR10J5Q8NHC4 309 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 OR5P3Q8WZ94 311 aa7.08□□□□□ -1.28
CD44-208ENST00000428726 COA4Q9NYJ1 87 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms