RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SLC9A3R2Q15599 337 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 ZNF260Q3ZCT1 412 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 MOB1BQ7L9L4 216 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 SSMEM1Q8WWF3 244 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 MALSU1Q96EH3 234 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 SSX3Q99909 188 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 BCL7BQ9BQE9 202 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 DPAGT1Q9H3H5 408 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 SLC23A1Q9UHI7 598 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 MGAT4AQ9UM21 535 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
SGCE-204ENST00000428696 CUBNO60494 3623 aa11.81□□□□□ -0.52
SGCE-204ENST00000428696 ODF3BA8MYP8 253 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 BUB1B-PAK6H3BSN5 160 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 F2RL2O00254 374 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 BET1O15155 118 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 PTHLHP12272 177 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 ELK1P19419 428 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 LOXL3P58215 753 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 LY6EQ16553 131 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 MINOS1Q5TGZ0 78 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 Q6ZPA2 131 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 DYNAPQ8N1N2 210 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 ZDHHC22Q8N966 263 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 OR52M1Q8NGK5 317 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 CREB3L1Q96BA8 519 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 ABCG5Q9H222 651 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 MMP28Q9H239 520 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 RSL24D1Q9UHA3 163 aaKnown RBP11.8□□□□□ -0.52
SGCE-204ENST00000428696 AMMECR1Q9Y4X0 333 aaPredicted RBP11.8□□□□□ -0.52
SGCE-204ENST00000428696 MINOS1-NBL1R4GNA1 71 aa11.8□□□□□ -0.52
SGCE-204ENST00000428696 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 A0A087X0M5 115 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 A0A1B0GX30 115 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 MEIS3P1A6NDR6 274 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 H3BUX3 64 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 XRCC3O43542 346 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 RGS11O94810 467 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 GSTT2P0CG29 244 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 GSTT2BP0CG30 244 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 CD34P28906 385 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 CEACAM6P40199 344 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 IER3P46695 156 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 REG1BP48304 166 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 PITPNAQ00169 270 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 HMGN3Q15651 99 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 PNLIPRP3Q17RR3 467 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 HLA-DRB5Q30154 266 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 LDLRAD2Q5SZI1 272 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 ZNF880Q6PDB4 577 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 BEND2Q8NDZ0 799 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 OR4P4Q8NGL7 312 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 RPEQ96AT9 228 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 DCUN1D5Q9BTE7 237 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 C6orf62Q9GZU0 229 aaPredicted RBP11.79□□□□□ -0.52
SGCE-204ENST00000428696 AUNIPQ9H7T9 357 aa11.79□□□□□ -0.52
SGCE-204ENST00000428696 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 A6NJ64 397 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 SLC31A2O15432 143 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 FABP7O15540 132 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 APOA1P02647 267 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 CRYBA1P05813 215 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 ZBTB25P24278 435 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 CD24P25063 80 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 KIR2DS4P43632 304 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 TAS2R20P59543 309 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 UBA52P62987 128 aaKnown RBP11.78□□□□□ -0.52
SGCE-204ENST00000428696 HTD2P86397 168 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 KIR2DS1Q14954 304 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 LRRC75BQ2VPJ9 315 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 MORN2Q502X0 79 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 TPTE2P1Q5T6R2 138 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 SNX29P2Q8IUI4 249 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 LYG1Q8N1E2 194 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 DYNC2LI1Q8TCX1 351 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 TOMM40LQ969M1 308 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 CHIAQ9BZP6 476 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
SGCE-204ENST00000428696 J3QRK9 145 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 CTDSP2O14595 271 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 SSX5O60225 188 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 IL3RAP26951 378 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 ARHGDIBP52566 201 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 IGSF11Q5DX21 431 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 STEAP3Q658P3 488 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 MOB3BQ86TA1 216 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 OR2AK2Q8NG84 335 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 OR10J5Q8NHC4 309 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 MCFD2Q8NI22 146 aa11.77□□□□□ -0.52
SGCE-204ENST00000428696 GINS4Q9BRT9 223 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms