RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NECAP1Q8NC96 275 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 SSX3Q99909 188 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 PRO1933Q9H354 126 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 TREM2Q9NZC2 230 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 KIAA2026Q5HYC2 2103 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 TRAV24A0A0B4J272 114 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 A0A1B0GU03 582 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 DUXBA0A1W2PPF3 345 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 CLEC18AA5D8T8 446 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF729A6NN14 1252 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 FAM166BA8MTA8 275 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 CLDN34H7C241 214 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 DLL1O00548 723 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 RHBDL1O75783 438 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 CA6P23280 308 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 TESK1Q15569 626 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF324BQ6AW86 544 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 Q6ZS49 121 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 COLCA1Q6ZS62 124 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 PPP1R32Q7Z5V6 425 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 H1FOOQ8IZA3 346 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 CLEC18CQ8NCF0 446 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 APOBEC3DQ96AK3 386 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 SNX22Q96L94 193 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 CXorf65A6NEN9 183 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 ANKRD30BLA7E2S9 258 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 SIRPB1O00241 398 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 PLP2Q04941 152 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 ADIRFQ15847 76 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 FAM90A2PQ658T7 463 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 SSX7Q7RTT5 188 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF295-AS1Q8N0V1 137 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 FAM58AQ8N1B3 248 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 Q8NFD4 153 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 HES7Q9BYE0 225 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 OR14J1Q9UGF5 321 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 RNF150Q9ULK6 438 aa6.41□□□□□ -1.38
SMARCC1-202ENST00000425518 TMEM265A0A087WTH1 108 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF726P1Q15940 193 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 C3AR1Q16581 482 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 TRIM61Q5EBN2 209 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 OR5A2Q8NGI9 324 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 OR4C12Q96R67 309 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 PRDM6Q9NQX0 595 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 SLC39A9Q9NUM3 307 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 GFOD1Q9NXC2 390 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 DLL3Q9NYJ7 618 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 TRAPPC2LQ9UL33 140 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 GPR179Q6PRD1 2367 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 OR5H1A6NKK0 313 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 IGKV1-39P01597 117 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 IGKV1D-39P04432 117 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 CLN3Q13286 438 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 GAMTQ14353 236 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 OR8G1Q15617 311 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 WDR25Q64LD2 544 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 LHX4Q969G2 390 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 IL22RA2Q969J5 263 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 RPUSD4Q96CM3 377 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 RIMS4Q9H426 269 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 PILRBQ9UKJ0 227 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 TCFL5Q9UL49 500 aa6.4□□□□□ -1.38
SMARCC1-202ENST00000425518 UBE2L5PA0A1B0GUS4 154 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 MAP1LC3B2A6NCE7 125 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 SYNGR4O95473 234 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 CLDN1O95832 211 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 MDH2P40926 338 aaKnown RBP6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 DPPA3Q6W0C5 159 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 SAXO1Q8IYX7 474 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF525Q8N782 197 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 OR5T1Q8NG75 326 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 THOC3Q96J01 351 aaKnown RBP6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 MAP1LC3BQ9GZQ8 125 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 RBKSQ9H477 322 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 C12orf49Q9H741 205 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 CISD1Q9NZ45 108 aaKnown RBP6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 GAB2Q9UQC2 676 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 ADAMTS20P59510 1910 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 CEP192Q8TEP8 1941 aa6.4□□□□□ -1.39
SMARCC1-202ENST00000425518 KIAA1324LA8MWY0 1029 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 GATCO43716 136 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF737O75373 536 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 CYB5R3P00387 301 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 CD55P08174 381 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 GPX4P36969 197 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 GFRA1P56159 465 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 HBG1P69891 147 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 HBG2P69892 147 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SP5Q6BEB4 398 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF573Q86YE8 665 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 CA5BP1Q8WTZ4 195 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SMIM7Q9BQ49 75 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SDF2L1Q9HCN8 221 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 PLA2G3Q9NZ20 509 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms