RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 TMEM41BQ5BJD5 291 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 BEND2Q8NDZ0 799 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 ZNF391Q9UJN7 358 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 A0A1W2PPQ1 181 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 C3orf80F5H4A9 247 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 SYNGR2O43760 224 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 IGKV1-39P01597 117 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 IGKV1D-39P04432 117 aa18.13■□□□□ 0.49
USP48-205ENST00000421625 ZNF845Q96IR2 970 aaPredicted RBP18.13■□□□□ 0.49
USP48-205ENST00000421625 GCGP01275 180 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 IFNA1P01562 189 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 IGKV1D-33P01593 117 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 IGKV1-33P01594 117 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 GPM6AP51674 278 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 NUBP1P53384 320 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 PMS2P11Q13670 270 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 CEACAM16Q2WEN9 425 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 MYPOPQ86VE0 399 aaPredicted RBP18.12■□□□□ 0.49
USP48-205ENST00000421625 LHX4Q969G2 390 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 WFIKKN1Q96NZ8 548 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 FOXB1Q99853 325 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 RNF150Q9ULK6 438 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 FUT9Q9Y231 359 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 KIR2DS1A0A191URI9 304 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 H7BYZ3 331 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 KIR2DS4P43632 304 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 CLDN15P56746 228 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 KIR2DS1Q14954 304 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 Q8NFD4 153 aa18.12■□□□□ 0.49
USP48-205ENST00000421625 KBTBD11O94819 623 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 IDH3GP51553 393 aaPredicted RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 MEF2BQ02080 365 aaPredicted RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 SRSF7Q16629 238 aaKnown RBP eCLIP18.11■□□□□ 0.49
USP48-205ENST00000421625 OR56B2PQ8NGI1 322 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 CPT1CQ8TCG5 803 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 OR4C12Q96R67 309 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 AGMATQ9BSE5 352 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 C19orf25Q9UFG5 118 aaPredicted RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 MMP7P09237 267 aaPredicted RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 FGF12P61328 243 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 GNB2P62879 340 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 TESK1Q15569 626 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 TGIF2LYQ8IUE0 185 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 RPP25LQ8N5L8 163 aaKnown RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 TMEM170AQ8WVE7 144 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 OR5B12Q96R08 314 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 WDR61Q9GZS3 305 aaKnown RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 MTCH1Q9NZJ7 389 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 ERRFI1Q9UJM3 462 aaPredicted RBP18.11■□□□□ 0.49
USP48-205ENST00000421625 RARRES3Q9UL19 164 aa18.11■□□□□ 0.49
USP48-205ENST00000421625 FAM90A10PA6NDY2 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A18PA6NE21 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A16PA6NEW6 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A20PA6NIJ5 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A8PA6NJQ4 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A7PA6NKC0 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A22PA8MWA6 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A12PA8MX19 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A5PA8MXJ8 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A23PA8MXZ1 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A15PP0C7V4 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A13PP0C7W8 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A14PP0C7W9 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 FAM90A24PP0C7X0 464 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 SERF2P84101 59 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 GATAD1Q8WUU5 269 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 SLC39A9Q9NUM3 307 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 UBE2L5PA0A1B0GUS4 154 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 RAC1P63000 192 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 PCOLCEQ15113 449 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 ZNF324BQ6AW86 544 aaPredicted RBP18.1■□□□□ 0.49
USP48-205ENST00000421625 TCEAL6Q6IPX3 200 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 SLC23A3Q6PIS1 610 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 AAED1Q7RTV5 226 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 ADGRG7Q96K78 797 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
USP48-205ENST00000421625 PDLIM4P50479 330 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 SPANXN5Q5MJ07 72 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 CPEB3Q8NE35 698 aaKnown RBP18.09■□□□□ 0.49
USP48-205ENST00000421625 MRPL30Q8TCC3 161 aaKnown RBP18.09■□□□□ 0.49
USP48-205ENST00000421625 TECTBQ96PL2 329 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 SNHG12Q9BXW3 62 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 IGKV1-5P01602 117 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 SLC25A6P12236 298 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 G0S2P27469 103 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 PRDX4Q13162 271 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 PARLQ9H300 379 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 PLA2G3Q9NZ20 509 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 OR2W1Q9Y3N9 320 aa18.09■□□□□ 0.49
USP48-205ENST00000421625 CD300LBA8K4G0 201 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 GALR2O43603 387 aaPredicted RBP18.08■□□□□ 0.49
USP48-205ENST00000421625 CTXN2P0C2S0 81 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 RAB4BP61018 213 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 PAX5Q02548 391 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 MRPL41Q8IXM3 137 aaKnown RBP18.08■□□□□ 0.49
USP48-205ENST00000421625 ACY3Q96HD9 319 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 SLC25A22Q9H936 323 aa18.08■□□□□ 0.49
USP48-205ENST00000421625 GDF9O60383 454 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 HRASP01112 189 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms