RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 A0A1W2PPK0 400 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 FCN1O00602 326 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 OVOL1O14753 267 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 CASQ2O14958 399 aaPredicted RBP6.26□□□□□ -1.41
VIM-202ENST00000421459 ORC5O43913 435 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 SOX15O60248 233 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 LALBAP00709 142 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 OR8U8P0C7N1 319 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 LIMS3P0CW19 117 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 LIMS4P0CW20 117 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 FCGR1AP12314 374 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 GP9P14770 177 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 IL3RAP26951 378 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 BLVRBP30043 206 aaPredicted RBP6.26□□□□□ -1.41
VIM-202ENST00000421459 OR3A3P47888 321 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 ETV1P50549 477 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 ACTBP60709 375 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 NDPQ00604 133 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 LSAMPQ13449 338 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
VIM-202ENST00000421459 SMN1Q16637 294 aaKnown RBP6.26□□□□□ -1.41
VIM-202ENST00000421459 KLHL22Q53GT1 634 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 NHLRC3Q5JS37 347 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 FAM27D1Q5T7N8 215 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 OR2G6Q5TZ20 316 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 ODF3L1Q8IXM7 274 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 PQLC1Q8N2U9 271 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 RHOXF1Q8NHV9 184 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 GPR148Q8TDV2 347 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 APH1BQ8WW43 257 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 ARPC1AQ92747 370 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 TMEM106AQ96A25 262 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 UBE2E2Q96LR5 201 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 MRPL20Q9BYC9 149 aaKnown RBP6.26□□□□□ -1.41
VIM-202ENST00000421459 OR51J1Q9H342 316 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 BANF2Q9H503 90 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 ETAA1Q9NY74 926 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 IL36GQ9NZH8 169 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 TRAPPC2LQ9UL33 140 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 VSIG4Q9Y279 399 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 GMPPBQ9Y5P6 360 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 A3GALT2U3KPV4 340 aa6.26□□□□□ -1.41
VIM-202ENST00000421459 TRAV8-7A0A075B6U6 113 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 TRAV41A0A0B4J266 112 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 LCE6AA0A183 80 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 SPINT2O43291 252 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 FADS2O95864 444 aaKnown RBP6.25□□□□□ -1.41
VIM-202ENST00000421459 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 EGR2P11161 476 aaPredicted RBP6.25□□□□□ -1.41
VIM-202ENST00000421459 BDKRB2P30411 391 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 PPP1CCP36873 323 aaKnown RBP6.25□□□□□ -1.41
VIM-202ENST00000421459 INSL3P51460 131 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ALDH3A2P51648 485 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ZNF137PP52743 207 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 RUNX1Q01196 453 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ECSCRQ19T08 205 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 MORN2Q502X0 79 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ZNF429Q86V71 674 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 CBR4Q8N4T8 237 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ZFP41Q8N8Y5 198 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 MINDY2Q8NBR6 621 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 OR8H1Q8NGG4 311 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 MUL1Q969V5 352 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 MRPL48Q96GC5 212 aaKnown RBP6.25□□□□□ -1.41
VIM-202ENST00000421459 MS4A10Q96PG2 267 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 S100A13Q99584 98 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ZNF184Q99676 751 aaPredicted RBP6.25□□□□□ -1.41
VIM-202ENST00000421459 SLC29A1Q99808 456 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 NABP2Q9BQ15 211 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 TAF9BQ9HBM6 251 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 PALMDQ9NP74 551 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 TMEM138Q9NPI0 162 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 OR2S2Q9NQN1 319 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 TPSG1Q9NRR2 321 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 GAB2Q9UQC2 676 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 PEX16Q9Y5Y5 336 aa6.25□□□□□ -1.41
VIM-202ENST00000421459 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 A0A1W2PN81 502 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 MCRIP1C9JLW8 97 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 LINC01619G3V211 115 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 NBR2O15453 112 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 LANCL1O43813 399 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 BAG2O95816 211 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 HLA-DRB1P01911 266 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 GTF2F2P13984 249 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 IGFBP3P17936 291 aaPredicted RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 CHRNA7P36544 502 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 PPP3R1P63098 170 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 RAB40BQ12829 278 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 LRRC36Q1X8D7 754 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 C5orf64Q2M2E5 130 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 MPV17LQ2QL34 196 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 C19orf54Q5BKX5 351 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 SIGIRRQ6IA17 410 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 RAB12Q6IQ22 244 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 LIN54Q6MZP7 749 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 GLIPR1L1Q6UWM5 242 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms