RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ZMAT5Q9UDW3 170 aaKnown RBP16.85■□□□□ 0.29
PTPN4-202ENST00000420482 UBE2QL1A1L167 161 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 RCC1P18754 421 aaPredicted RBP16.84■□□□□ 0.29
PTPN4-202ENST00000420482 MYCNOSP40205 109 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 GPR12P47775 334 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 THBS3P49746 956 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 PNLIPRP3Q17RR3 467 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 ACSM3Q53FZ2 586 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 RNLSQ5VYX0 342 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 Q8N9W7 124 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 ZNF439Q8NDP4 499 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 KLHL30-AS1Q8NEE0 82 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 OR1L1Q8NH94 360 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 PHYHIPQ92561 330 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 FAM46BQ96A09 425 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 S1PR3Q99500 378 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 DCLRE1BQ9H816 532 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 FKBP14Q9NWM8 211 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 LINC00527Q9UJ94 153 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 JPT1Q9UK76 154 aa16.84■□□□□ 0.29
PTPN4-202ENST00000420482 H0YHG0 523 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 LANCL1O43813 399 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 MPIG6BO95866 241 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 CDK1P06493 297 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 CT45A1Q5HYN5 189 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 CXorf66Q5JRM2 361 aaPredicted RBP16.83■□□□□ 0.28
PTPN4-202ENST00000420482 RBM48Q5RL73 367 aaKnown RBP16.83■□□□□ 0.28
PTPN4-202ENST00000420482 LAIR2Q6ISS4 152 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 LYPD6Q86Y78 171 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF695Q8IW36 515 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 MRPL41Q8IXM3 137 aaKnown RBP16.83■□□□□ 0.28
PTPN4-202ENST00000420482 CT45A3Q8NHU0 189 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 MBNL3Q9NUK0 354 aaKnown RBP16.83■□□□□ 0.28
PTPN4-202ENST00000420482 ABRACLQ9P1F3 81 aa16.83■□□□□ 0.28
PTPN4-202ENST00000420482 PTGES3LE9PB15 166 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 SLC31A2O15432 143 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 SOX6P35712 828 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 GP2P55259 537 aaKnown RBP16.82■□□□□ 0.28
PTPN4-202ENST00000420482 HTD2P86397 168 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 MORN2Q502X0 79 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 NKAPLQ5M9Q1 402 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 C8orf86Q6ZUL3 223 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 KCNG3Q8TAE7 436 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 GALMQ96C23 342 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 ABHD14AQ9BUJ0 271 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 TMED9Q9BVK6 235 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 TMEM59Q9BXS4 323 aa16.82■□□□□ 0.28
PTPN4-202ENST00000420482 OR5H8P0DN80 308 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 VDAC1P21796 283 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 VHLP40337 213 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF134P52741 427 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 SPHARQ15513 63 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 MED22Q15528 200 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 HSD17B12Q53GQ0 312 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 UNQ9370/PRO34162Q6UXP9 181 aa16.81■□□□□ 0.28
PTPN4-202ENST00000420482 ELANEP08246 267 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 SRMP19623 302 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 RANBP1P43487 201 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 FOXE3Q13461 319 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 DCTN2Q13561 401 aaKnown RBP16.8■□□□□ 0.28
PTPN4-202ENST00000420482 C6orf141Q5SZD1 244 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 SIGIRRQ6IA17 410 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 FAM53AQ6NSI3 398 aaPredicted RBP16.8■□□□□ 0.28
PTPN4-202ENST00000420482 MRPL30Q8TCC3 161 aaKnown RBP16.8■□□□□ 0.28
PTPN4-202ENST00000420482 PLSCR3Q9NRY6 295 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 STEAP1Q9UHE8 339 aa16.8■□□□□ 0.28
PTPN4-202ENST00000420482 YPEL1O60688 119 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 HTR2CP28335 458 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 RPS27AP62979 156 aaKnown RBP16.79■□□□□ 0.28
PTPN4-202ENST00000420482 EGFEM1PQ0D2K5 195 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 LSAMPQ13449 338 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 MMDQ15546 238 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 DEFB121Q5J5C9 76 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 LY6G6FQ5SQ64 297 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 C1orf100Q5SVJ3 147 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 CEACAM19Q7Z692 300 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 FAM71E2Q8N5Q1 922 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 OR2AK2Q8NG84 335 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 UFD1Q92890 307 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 YPEL2Q96QA6 119 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 CHCHD6Q9BRQ6 235 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 CHMP1AQ9HD42 196 aaPredicted RBP16.79■□□□□ 0.28
PTPN4-202ENST00000420482 TPRKBQ9Y3C4 175 aa16.79■□□□□ 0.28
PTPN4-202ENST00000420482 LINC01548A6NM66 108 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF736B4DX44 427 aaPredicted RBP16.78■□□□□ 0.28
PTPN4-202ENST00000420482 BPNT1O95861 308 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 VSIG8P0DPA2 414 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 CHATP28329 748 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 OR52L2PQ8NGH6 319 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 OR8U1Q8NH10 309 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF580Q9UK33 172 aa16.78■□□□□ 0.28
PTPN4-202ENST00000420482 PPP1CCP36873 323 aaKnown RBP16.77■□□□□ 0.28
PTPN4-202ENST00000420482 CDX1P47902 265 aaPredicted RBP16.77■□□□□ 0.28
PTPN4-202ENST00000420482 F2RL1P55085 397 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 INSL4Q14641 139 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 TRAM1Q15629 374 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 MOB1BQ7L9L4 216 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 LRRTM1Q86UE6 522 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 OR6M1Q8NGM8 313 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms