RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 ARL11Q969Q4 196 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 YPEL2Q96QA6 119 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 GHITMQ9H3K2 345 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 CALYQ9NYX4 217 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 GAB2Q9UQC2 676 aa11.77□□□□□ -0.53
SHMT1P1-201ENST00000419974 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 SNRPGP15A8MWD9 76 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 SLC22A5O76082 557 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 IGHV2-5P01817 119 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 DLX6P56179 175 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 TAS2R31P59538 309 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 RND3P61587 244 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 GLCCI1Q86VQ1 547 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 TPRX1Q8N7U7 411 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 FAM168AQ92567 244 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 NRGNQ92686 78 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 VSIG4Q9Y279 399 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 MED13LQ71F56 2210 aa11.76□□□□□ -0.53
SHMT1P1-201ENST00000419974 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 BET1O15155 118 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 RGS11O94810 467 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF728P0DKX0 622 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 AADACP22760 399 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 DNASE1P24855 282 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 SSTR5P35346 364 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 LMO4P61968 165 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 TATDN3Q17R31 274 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 METTL11BQ5VVY1 283 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 GLDNQ6ZMI3 551 aaPredicted RBP11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 FAM185AQ8N0U4 392 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR1L1Q8NH94 360 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 EDARADDQ8WWZ3 215 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 DACT3Q96B18 629 aaPredicted RBP11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 AKR1E2Q96JD6 320 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF714Q96N38 554 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 RTBDNQ9BSG5 229 aaPredicted RBP11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 RDH8Q9NYR8 311 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF221Q9UK13 617 aa11.75□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 TRAV6A0A075B6T7 132 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A0B4J293 547 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 LIPFP07098 398 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 SLC25A16P16260 332 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 NFYAP23511 347 aaPredicted RBP11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 CEACAM6P40199 344 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 HERV-K104P61576 105 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 MORN2Q502X0 79 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 LDLRAD3Q86YD5 345 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 C11orf42Q8N5U0 333 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 KIR3DL3Q8N743 410 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 BVESQ8NE79 360 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 IL1F10Q8WWZ1 152 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 C1orf159Q96HA4 380 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 FXYD6Q9H0Q3 95 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 GFOD1Q9NXC2 390 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 ING3Q9NXR8 418 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF69Q9UC07 566 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 FLVCR2Q9UPI3 526 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 MAP1AP78559 2803 aaPredicted RBP11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 VPS13CQ709C8 3753 aa11.74□□□□□ -0.53
SHMT1P1-201ENST00000419974 FAM172BPA6NC97 362 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 M0R1W7 72 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 HSPA12AO43301 675 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR4E1P0C645 316 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 CD34P28906 385 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 GNRHRP30968 328 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 GNB2P62879 340 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 PAX2Q02962 417 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF273Q14593 569 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 KCTD9Q7L273 389 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms