RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DYRK2Q92630 601 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 OR2W1Q9Y3N9 320 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 COL5A3P25940 1745 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-205ENST00000418258 IGHV1-45A0A0A0MS14 117 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 J3QT63 122 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 FXYD1O00168 92 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 RELBQ01201 579 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 TEX30Q5JUR7 227 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 WIPI2Q9Y4P8 454 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 TCRBV16S1A1N1A0A5B0 115 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 ALX3O95076 343 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 UCP2P55851 309 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 TEPPQ6URK8 271 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 SYT8Q8NBV8 401 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 DHRS7CA6NNS2 312 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 PRR33A8MZF0 331 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 GAPDHP04406 335 aaKnown RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CDC20Q12834 499 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 DDB2Q92466 427 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 ADIPOR1Q96A54 375 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CCL28Q9NRJ3 127 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 SPTBN2O15020 2390 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF236Q9UL36 1845 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 IGKV3D-11A0A0A0MRZ8 115 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 A1L4Q6 167 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 IGKV3-11P04433 115 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 NUBP1P53384 320 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 LAMTOR1Q6IAA8 161 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 A0A1W2PS18 150 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 WNT9BO14905 357 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 TMEM33P57088 247 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CEBPEQ15744 281 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 OR8A1Q8NGG7 326 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 OR1N2Q8NGR9 330 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 IGHV3-72A0A0B4J1Y9 119 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 SRSF10O75494 262 aaKnown RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 KLF7O75840 302 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CELA2AP08217 269 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CSF2RBP32927 897 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 HSPB8Q9UJY1 196 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 RNASE1P07998 156 aaKnown RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 CTSSP25774 331 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 FGF9P31371 208 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 LGALSLQ3ZCW2 172 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 SLC25A53Q5H9E4 307 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 DDA1Q9BW61 102 aa9.79□□□□□ -0.84
PTCH1-205ENST00000418258 TCF20Q9UGU0 1960 aaKnown RBP9.79□□□□□ -0.84
PTCH1-205ENST00000418258 DUXBA0A1W2PPF3 345 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF735P0CB33 412 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 FOXL2P58012 376 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 FAM214BQ7L5A3 538 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 BHLHA9Q7RTU4 235 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 LSMEM1Q8N8F7 131 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 OR1L6Q8NGR2 347 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF721Q8TF20 911 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 ZDHHC8Q9ULC8 765 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 CXorf1O96002 111 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-205ENST00000418258 CD300LDQ6UXZ3 194 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 GPX7Q96SL4 187 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-205ENST00000418258 ABCA1O95477 2261 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 CLDN34H7C241 214 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 PSG2P11465 335 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 LPAR5Q9H1C0 372 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 METTL1Q9UBP6 276 aaKnown RBP9.78□□□□□ -0.84
PTCH1-205ENST00000418258 TMEM251Q8N6I4 163 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 FREM3P0C091 2139 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 STRCP1A6NGW2 1772 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 CTSDP07339 412 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-205ENST00000418258 SP9P0CG40 484 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 P2RY6Q15077 328 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 PLPPR5Q32ZL2 321 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 C12orf57Q99622 126 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 DOCK10Q96BY6 2186 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 OR4C46A6NHA9 309 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 SIAH2O43255 324 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 DEDDO75618 318 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 TMEM78Q5T7P6 136 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 ANAPC16Q96DE5 110 aa9.78□□□□□ -0.84
PTCH1-205ENST00000418258 A0A1B0GU03 582 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 PGLYRP3Q96LB9 341 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 A0A1W2PQF6 199 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 IGHV4-34P06331 123 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 CTF1Q16619 201 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF385AQ96PM9 386 aaKnown RBP9.77□□□□□ -0.84
PTCH1-205ENST00000418258 ADAP1O75689 374 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 PRSS54Q6PEW0 395 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 MOB4Q9Y3A3 225 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 B2MP61769 119 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms