RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MT-ND4P03905 459 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 LGALS1P09382 135 aaKnown RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 IGHV4-30-4P0DP06 118 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 BLVRBP30043 206 aaPredicted RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 ZNF93P35789 620 aaPredicted RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 CHRNA7P36544 502 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 GBX2P52951 348 aaPredicted RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 PPP3R1P63098 170 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 CT45A1Q5HYN5 189 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 SYT6Q5T7P8 510 aaPredicted RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 DDI2Q5TDH0 399 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 STEAP3Q658P3 488 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 LIN54Q6MZP7 749 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ASCL4Q6XD76 172 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ZNF497Q6ZNH5 498 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ZNF439Q8NDP4 499 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 CT45A3Q8NHU0 189 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ABHD5Q8WTS1 349 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 FLYWCH2Q96CP2 140 aaKnown RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 RSRP1Q9BUV0 290 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ELOVL1Q9BW60 279 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 JAM3Q9BX67 310 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ANKRD60Q9BZ19 345 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 TOLLIPQ9H0E2 274 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ISG20L2Q9H9L3 353 aaKnown RBP7.75□□□□□ -1.17
MDC1-202ENST00000416571 EDA2RQ9HAV5 297 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 SPACA1Q9HBV2 294 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 IL36GQ9NZH8 169 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 ORC6Q9Y5N6 252 aa7.75□□□□□ -1.17
MDC1-202ENST00000416571 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 MAGEA13PA6NCF6 341 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 FAM90A10PA6NDY2 464 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 HSPA12AO43301 675 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 IFNA6P05013 189 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 GTF2F2P13984 249 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 CNTFRP26992 372 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 CD40LGP29965 261 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 VHLP40337 213 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 VEGFCP49767 419 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 ZNF134P52741 427 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 PLGLAQ15195 96 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 C5orf64Q2M2E5 130 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 SLC22A6Q4U2R8 563 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 TRAT1Q6PIZ9 186 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 ANKRD13BQ86YJ7 626 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 MINDY2Q8NBR6 621 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 OR4K15Q8NH41 348 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 LGALS12Q96DT0 336 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 TMEM138Q9NPI0 162 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 OR2S2Q9NQN1 319 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 NKX1-2Q9UD57 310 aaPredicted RBP7.74□□□□□ -1.17
MDC1-202ENST00000416571 OAZ3Q9UMX2 235 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 STUB1Q9UNE7 303 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 EXOGQ9Y2C4 368 aaKnown RBP7.74□□□□□ -1.17
MDC1-202ENST00000416571 A3GALT2U3KPV4 340 aa7.74□□□□□ -1.17
MDC1-202ENST00000416571 SAC3D1A6NKF1 404 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 FADS2O95864 444 aaKnown RBP7.73□□□□□ -1.17
MDC1-202ENST00000416571 HBZP02008 142 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 ARSBP15848 533 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 BDKRB2P30411 391 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 SNRPGP62308 76 aaKnown RBP7.73□□□□□ -1.17
MDC1-202ENST00000416571 TMEM267Q0VDI3 215 aaPredicted RBP7.73□□□□□ -1.17
MDC1-202ENST00000416571 GPR176Q14439 515 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 SLC25A30Q5SVS4 291 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 PYHIN1Q6K0P9 492 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 ZNF529Q6P280 563 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 TCTEX1D1Q8N7M0 179 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 OR1L1Q8NH94 360 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 GPR148Q8TDV2 347 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 CASTOR1Q8WTX7 329 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 SLC7A6OSQ96CW6 309 aaPredicted RBP7.73□□□□□ -1.17
MDC1-202ENST00000416571 ABHD14AQ9BUJ0 271 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 KCNIP1Q9NZI2 227 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
MDC1-202ENST00000416571 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
MDC1-202ENST00000416571 A0A1W2PP11 408 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 A8MZ25 164 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 E9PI62 339 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 ARPC1BO15143 372 aaKnown RBP7.72□□□□□ -1.17
MDC1-202ENST00000416571 IGHV3-11P01762 117 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 HSPB1P04792 205 aaKnown RBP7.72□□□□□ -1.17
MDC1-202ENST00000416571 MORN2Q502X0 79 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 C1orf146Q5VVC0 180 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 RAB12Q6IQ22 244 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 HAPLN4Q86UW8 402 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 MRPS24Q96EL2 167 aaKnown RBP7.72□□□□□ -1.17
MDC1-202ENST00000416571 CENPNQ96H22 339 aaPredicted RBP7.72□□□□□ -1.17
MDC1-202ENST00000416571 RITA1Q96K30 269 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 Q96MT0 163 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
MDC1-202ENST00000416571 ERVK13-1Q9NX77 482 aa7.72□□□□□ -1.17
MDC1-202ENST00000416571 LYSTQ99698 3801 aa7.71□□□□□ -1.17
MDC1-202ENST00000416571 SOX15O60248 233 aa7.71□□□□□ -1.18
MDC1-202ENST00000416571 CA11O75493 328 aa7.71□□□□□ -1.18
MDC1-202ENST00000416571 RGS11O94810 467 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms