RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CHATP28329 748 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 GPR12P47775 334 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 KRTAP10-11P60412 298 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 SLC35A2P78381 396 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 GPR50Q13585 617 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 Q3ZCU0 254 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 RNLSQ5VYX0 342 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 LCNL1Q6ZST4 164 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 C8orf86Q6ZUL3 223 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 SLC35E3Q7Z769 313 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 STPG2Q8N412 459 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 MRAPQ8TCY5 172 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 HSPB9Q9BQS6 159 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 GNG12Q9UBI6 72 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 ERGIC3Q9Y282 383 aa11.89□□□□□ -0.51
UBXN4-203ENST00000416538 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 K7EIL1 84 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 FUT3P21217 361 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
UBXN4-203ENST00000416538 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
UBXN4-203ENST00000416538 F2RL1P55085 397 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 QRFPP83859 136 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 NKAPLQ5M9Q1 402 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 RBM48Q5RL73 367 aaKnown RBP11.88□□□□□ -0.51
UBXN4-203ENST00000416538 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 REC114Q7Z4M0 266 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 MRPL41Q8IXM3 137 aaKnown RBP11.88□□□□□ -0.51
UBXN4-203ENST00000416538 FAM71E2Q8N5Q1 922 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 CHPT1Q8WUD6 406 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
UBXN4-203ENST00000416538 SPINT2O43291 252 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 CD37P11049 281 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 HTR2CP28335 458 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 CD1BP29016 333 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 THBS3P49746 956 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 CFHR3Q02985 330 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 LSAMPQ13449 338 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 SPHARQ15513 63 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 MORN2Q502X0 79 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 C6orf201Q7Z4U5 140 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 S1PR3Q99500 378 aa11.87□□□□□ -0.51
UBXN4-203ENST00000416538 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
UBXN4-203ENST00000416538 PARP12Q9H0J9 701 aaKnown RBP11.87□□□□□ -0.51
UBXN4-203ENST00000416538 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
UBXN4-203ENST00000416538 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
UBXN4-203ENST00000416538 H0YHG0 523 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 CA11O75493 328 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 MOSP00540 346 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 GLAP06280 429 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 UCHL1P09936 223 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 IL3RAP26951 378 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
UBXN4-203ENST00000416538 RPS25P62851 125 aaKnown RBP11.86□□□□□ -0.51
UBXN4-203ENST00000416538 RPS27AP62979 156 aaKnown RBP11.86□□□□□ -0.51
UBXN4-203ENST00000416538 MED22Q15528 200 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 HMGN3Q15651 99 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 TRAT1Q6PIZ9 186 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 TMEM91Q6ZNR0 172 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 SVOPQ8N4V2 548 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 THRSPQ92748 146 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 RITA1Q96K30 269 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 P2RX4Q99571 388 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 ABHD14AQ9BUJ0 271 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 CST11Q9H112 138 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 VCXQ9H320 206 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 OR2S2Q9NQN1 319 aa11.86□□□□□ -0.51
UBXN4-203ENST00000416538 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 TMEM14DPA8MWL7 114 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 SLC22A1O15245 554 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 LANCL1O43813 399 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
UBXN4-203ENST00000416538 CNTFRP26992 372 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 OR3A3P47888 321 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 DEFB136Q30KP8 78 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 CEACAM19Q7Z692 300 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 MS4A15Q8N5U1 240 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 TMEM203Q969S6 136 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
UBXN4-203ENST00000416538 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
UBXN4-203ENST00000416538 FAAP24Q9BTP7 215 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 DUSP21Q9H596 190 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 GHRLQ9UBU3 117 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms