RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CDK1P06493 297 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 UBBP0CG47 229 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 RCC1P18754 421 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 MYCNOSP40205 109 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 VHLP40337 213 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 GPR12P47775 334 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 THBS3P49746 956 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 ACSM3Q53FZ2 586 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 MRPL41Q8IXM3 137 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 S1PR3Q99500 378 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 RASL11BQ9BPW5 248 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 OR2S2Q9NQN1 319 aa13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 MBNL3Q9NUK0 354 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-208ENST00000416159 LINC01548A6NM66 108 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 NUDT19A8MXV4 375 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 H0YHG0 523 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 LANCL1O43813 399 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 MPIG6BO95866 241 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 GABPB1Q06547 395 aaPredicted RBP13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 PNLIPRP3Q17RR3 467 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 MORN2Q502X0 79 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 GLT8D1Q68CQ7 371 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 TEX38Q6PEX7 206 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 PHYHIPQ92561 330 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 FAM46BQ96A09 425 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 NEDD4LQ96PU5 975 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 MCRIP2Q9BUT9 160 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 PLSCR3Q9NRY6 295 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 LRRC42Q9Y546 428 aa13.86□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF736B4DX44 427 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 PTGES3LE9PB15 166 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 C1orf100Q5SVJ3 147 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 C6orf141Q5SZD1 244 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 C18orf65Q6ZTR6 163 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 C8orf86Q6ZUL3 223 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 KLHL30-AS1Q8NEE0 82 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 MRPL30Q8TCC3 161 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 DPF1Q92782 380 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 DCLRE1BQ9H816 532 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 SCN3BQ9NY72 215 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 JPT1Q9UK76 154 aa13.85□□□□□ -0.19
PDLIM2-208ENST00000416159 RRP9O43818 475 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 RGS11O94810 467 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 GP2P55259 537 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 HTD2P86397 168 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 INSL4Q14641 139 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 SPHARQ15513 63 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 NKAPLQ5M9Q1 402 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 RBM48Q5RL73 367 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 LRRTM1Q86UE6 522 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF695Q8IW36 515 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 OR52L2PQ8NGH6 319 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 TMED9Q9BVK6 235 aa13.84□□□□□ -0.19
PDLIM2-208ENST00000416159 K7EIL1 84 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 YPEL1O60688 119 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 VSIG8P0DPA2 414 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 SRMP19623 302 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 CHATP28329 748 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 SOX6P35712 828 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 F2RL1P55085 397 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 RPS27AP62979 156 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 EGFEM1PQ0D2K5 195 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 LSAMPQ13449 338 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 LY6G6FQ5SQ64 297 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 FAM27D1Q5T7N8 215 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 FAM71E2Q8N5Q1 922 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 KCNG3Q8TAE7 436 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 GALMQ96C23 342 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 YPEL2Q96QA6 119 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 P2RX4Q99571 388 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 ABHD14AQ9BUJ0 271 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 TMEM59Q9BXS4 323 aa13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 LSM2Q9Y333 95 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-208ENST00000416159 ELANEP08246 267 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 CD37P11049 281 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 KRTAP10-11P60412 298 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 FOXE3Q13461 319 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 MED22Q15528 200 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 HSD17B12Q53GQ0 312 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 OR10K2Q6IF99 312 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 CEACAM19Q7Z692 300 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 SULT4A1Q9BR01 284 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 FAAP24Q9BTP7 215 aa13.82□□□□□ -0.2
PDLIM2-208ENST00000416159 DNAH3Q8TD57 4116 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 UCHL1P09936 223 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 HTR2CP28335 458 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 HOXD3P31249 432 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 PPP1CCP36873 323 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 IRF3Q14653 427 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 GNMTQ14749 295 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 HMGN3Q15651 99 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 C5orf24Q7Z6I8 188 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 RNF152Q8N8N0 203 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 CYYR1Q96J86 154 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 CHCHD6Q9BRQ6 235 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 TM2D1Q9BX74 207 aa13.81□□□□□ -0.2
PDLIM2-208ENST00000416159 ABRACLQ9P1F3 81 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms