RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 hADV38S2A0JD32 116 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 CRYBA1P05813 215 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 SRSF7Q16629 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 RNASE12Q5GAN4 147 aaKnown RBP13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 Q6ZS49 121 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 CCDC107Q8WV48 283 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 RPUSD1Q9UJJ7 312 aaKnown RBP13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 UBE2J1Q9Y385 318 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 LINC00312Q9Y6C7 94 aa13.54□□□□□ -0.24
CDC42EP1-202ENST00000415670 TRGV10A0A0A0MS01 117 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 TRAV39A0A0B4J263 110 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 MEIS3P1A6NDR6 274 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 C22orf46C9J442 243 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 NDUFA7O95182 113 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 RCC1P18754 421 aaPredicted RBP13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 CD40LGP29965 261 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 GLP1RP43220 463 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 PPP5CP53041 499 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 PROK1P58294 105 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 BEAN1Q3B7T3 259 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 C6orf183Q5T699 404 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 TMEM200BQ69YZ2 307 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 TRAT1Q6PIZ9 186 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 HOGA1Q86XE5 327 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 FAM185AQ8N0U4 392 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 Q8N402 240 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 ZNF565Q8N9K5 539 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 LY6G5BQ8NDX9 201 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 OR13A1Q8NGR1 328 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 SETD6Q8TBK2 473 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 DMRTB1Q96MA1 342 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 IFT46Q9NQC8 304 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 ZNF230Q9UIE0 474 aaPredicted RBP13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 MGAT4AQ9UM21 535 aa13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 RBMX2Q9Y388 322 aaKnown RBP13.53□□□□□ -0.24
CDC42EP1-202ENST00000415670 TIMM23O14925 209 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 RBBP9O75884 186 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 CGB3P0DN86 165 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 CGB7P0DN87 165 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 NAT1P18440 290 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 GZMHP20718 246 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 RCVRNP35243 200 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 SSBP1Q04837 148 aaKnown RBP13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF273Q14593 569 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 GVQW1Q8N7I0 195 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 MRGPRDQ8TDS7 321 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 ST6GALNAC5Q9BVH7 336 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 KLK11Q9UBX7 282 aa13.52□□□□□ -0.25
CDC42EP1-202ENST00000415670 PLXNB1O43157 2135 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 A0A1W2PQ09 198 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF729A6NN14 1252 aaPredicted RBP13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 ORC5O43913 435 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 PPIAL4GP0DN37 164 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 ACTBP60709 375 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 HLA-DRB3P79483 266 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 HMGN3Q15651 99 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 MAFIPQ8WZ33 124 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 CCDC32Q9BV29 185 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF286AQ9HBT8 521 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 KCNIP1Q9NZI2 227 aa13.51□□□□□ -0.25
CDC42EP1-202ENST00000415670 DNAH3Q8TD57 4116 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 KIR2DS1A0A191URI9 304 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 A0A1W2PPH5 198 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 MEX3AA1L020 520 aaKnown RBP13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 TRDCB7Z8K6 153 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 C12orf77C9JDV5 145 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 C15orf65H3BRN8 121 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 LANCL1O43813 399 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 IGHV4-59P01825 116 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 LIPFP07098 398 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 GDNFP39905 211 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 KIR2DS4P43632 304 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 DLX6P56179 175 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 KIR2DS1Q14954 304 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 BAK1Q16611 211 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 SNAPC3Q92966 411 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF714Q96N38 554 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 GAL3ST2Q9H3Q3 398 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 LINC00574Q9H8X3 128 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 TAF9BQ9HBM6 251 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF107Q9UII5 783 aaPredicted RBP13.5□□□□□ -0.25
CDC42EP1-202ENST00000415670 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 KBTBD11-OT1A0A1B0GTJ5 212 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 NPIPB11E5RHQ5 1161 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 J3QRK9 145 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 GPR137BO60478 399 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 FCER2P06734 321 aa13.49□□□□□ -0.25
CDC42EP1-202ENST00000415670 ZNF728P0DKX0 622 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms