RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 C5orf49A4QMS7 147 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 OR5B21A6NL26 309 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 SEC14L6B5MCN3 397 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 DEGS1O15121 323 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 CD55P08174 381 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 SELLP14151 372 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
CD44-206ENST00000415148 DEFA6Q01524 100 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 TMEM267Q0VDI3 215 aaPredicted RBP8.34□□□□□ -1.07
CD44-206ENST00000415148 FAM90A2PQ658T7 463 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 THNSL2Q86YJ6 484 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 RSG1Q9BU20 258 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PKIBQ9C010 78 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PRDM6Q9NQX0 595 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 TMEM265A0A087WTH1 108 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
CD44-206ENST00000415148 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.33□□□□□ -1.08
CD44-206ENST00000415148 HLA-HP01893 362 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 NDUFB7P17568 137 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 OTX2P32243 289 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 MDH2P40926 338 aaKnown RBP8.33□□□□□ -1.08
CD44-206ENST00000415148 ZNF726P1Q15940 193 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 IGFBP7Q16270 282 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 DCAF12Q5T6F0 453 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 S100PBPQ96BU1 408 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 FAM173AQ9BQD7 235 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 PRRG4Q9BZD6 226 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 ZNF665Q9H7R5 613 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
CD44-206ENST00000415148 PINLYPA6NC86 204 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 ANKRD30BLA7E2S9 258 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 CD300LBA8K4G0 201 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 SYNGR2O43760 224 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 SYNGR4O95473 234 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 CFIP05156 583 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 CCNOP22674 350 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 APLNRP35414 380 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 LHX2P50458 406 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 RND2P52198 227 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 CD81P60033 236 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 RAB11AP62491 216 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 GNG3P63215 75 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 DNLZQ5SXM8 178 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 SLC25A24Q6NUK1 477 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 MOB1BQ7L9L4 216 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 FAM58AQ8N1B3 248 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 HLA-CQ95604 372 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 POM121L2Q96KW2 1035 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 SNX22Q96L94 193 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 STRADBQ9C0K7 418 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 ERRFI1Q9UJM3 462 aaPredicted RBP8.33□□□□□ -1.08
CD44-206ENST00000415148 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
CD44-206ENST00000415148 TRAV24A0A0B4J272 114 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 ZFP92A6NM28 416 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 SYNGR1O43759 233 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 CER1O95813 267 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 IGHV3-9P01782 118 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 PSG2P11465 335 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 HBG1P69891 147 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 HBG2P69892 147 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 PLP2Q04941 152 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 HNF4GQ14541 408 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 LRRC75BQ2VPJ9 315 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 C20orf204Q6ZNR8 217 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 PINX1Q96BK5 328 aaKnown RBP8.32□□□□□ -1.08
CD44-206ENST00000415148 DLL3Q9NYJ7 618 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 B4GALT7Q9UBV7 327 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 A0A096LPE4 126 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 A0A1W2PPZ6 126 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 OR5H1A6NKK0 313 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 CLDN34H7C241 214 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 IFNL4K9M1U5 179 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 CYB5R3P00387 301 aaPredicted RBP8.32□□□□□ -1.08
CD44-206ENST00000415148 BCL2P10415 239 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 CLDN18P56856 261 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 WDR25Q64LD2 544 aaPredicted RBP8.32□□□□□ -1.08
CD44-206ENST00000415148 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 C6orf15Q6UXA7 325 aaPredicted RBP8.32□□□□□ -1.08
CD44-206ENST00000415148 Q6ZRM9 215 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 FAM210BQ96KR6 192 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 ZPBPQ9BS86 351 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 ZNF552Q9H707 407 aaPredicted RBP8.32□□□□□ -1.08
CD44-206ENST00000415148 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 PSENENQ9NZ42 101 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 LRFN1Q9P244 771 aa8.32□□□□□ -1.08
CD44-206ENST00000415148 NBEAQ8NFP9 2946 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 HS3ST1O14792 307 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 PPP1R2P9O14990 202 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 GALR2O43603 387 aaPredicted RBP8.31□□□□□ -1.08
CD44-206ENST00000415148 NKX6-1P78426 367 aaPredicted RBP8.31□□□□□ -1.08
CD44-206ENST00000415148 PRSS8Q16651 343 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 CLEC12BQ2HXU8 276 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 ZNF787Q6DD87 383 aa8.31□□□□□ -1.08
CD44-206ENST00000415148 MRGPRGQ86SM5 289 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms