RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 KCNK15Q9H427 330 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 NARFLQ9H6Q4 476 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 DVL1O14640 695 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 CHEK1O14757 476 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 SEC11BP0C7V7 166 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 LURAP1Q96LR2 239 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 PIMREGQ9BSJ6 248 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
PTPRF-205ENST00000414879 ADAM10O14672 748 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 GOSR1O95249 250 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 HBZP02008 142 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 LHX2P50458 406 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CCL8P80075 99 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 ATP1A1-AS1Q5TC04 95 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 C19orf48Q6RUI8 117 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 HSD17B13Q7Z5P4 300 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 IDI2-AS1Q9NZ38 188 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 MMP24Q9Y5R2 645 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 hCG_38984A0A1B0GV85 526 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 PIN1P1O15428 100 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CLDN14O95500 239 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 SPP1P10451 314 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CLDN18P56856 261 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 PHYHD1Q5SRE7 291 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 OR5R1Q8NH85 324 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 TM2D1Q9BX74 207 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 FBLN5Q9UBX5 448 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CKAP5Q14008 2032 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CHST1O43916 411 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 SNAI3Q3KNW1 292 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 MMD2Q8IY49 270 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 RELL2Q8NC24 303 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 OR10G4Q8NGN3 311 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 OR10G9Q8NGN4 311 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF552Q9H707 407 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 COL4A6Q14031 1691 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 ABCA7Q8IZY2 2146 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 TM4SF5O14894 197 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CD74P04233 296 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 PDLIM4P50479 330 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 SUCLG1P53597 346 aaKnown RBP10.3□□□□□ -0.76
PTPRF-205ENST00000414879 SPCS3P61009 180 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 Q8WTZ3 238 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 TXNDC17Q9BRA2 123 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 CABLES2Q9BTV7 478 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 SLC35B3Q9H1N7 401 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 PITPNC1Q9UKF7 332 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 WSB1Q9Y6I7 421 aa10.3□□□□□ -0.76
PTPRF-205ENST00000414879 ATP6V1G2-DDX39BF2Z307 99 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 ADAP1O75689 374 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 NPY1RP25929 384 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 SERF2P84101 59 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM186Q96B77 213 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 SLC25A38Q96DW6 304 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 SCNM1Q9BWG6 230 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM222Q9H0R3 208 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 FAM106CPP0CH98 169 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 ZP3P21754 424 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM50BP56557 158 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 LAIR2Q6ISS4 152 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 STPG2Q8N412 459 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 MS4A3Q96HJ5 214 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
PTPRF-205ENST00000414879 WASHC3Q9Y3C0 194 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 TRBV23-1A0A0A0MS06 115 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 LEUTXA8MZ59 168 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 FOXH1O75593 365 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 CFDP00746 253 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-205ENST00000414879 SELENOTP62341 195 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 ADAM5Q6NVV9 412 aa10.29□□□□□ -0.76
PTPRF-205ENST00000414879 LYPD3O95274 346 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 AANATQ16613 207 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 DPF1Q92782 380 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 GAB2Q9UQC2 676 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 SPTA1P02549 2419 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 PERPQ96FX8 193 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 CCL13Q99616 98 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM204Q9BSN7 226 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 AKIRIN1Q9H9L7 192 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 CALYQ9NYX4 217 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 DLL1O00548 723 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 RGS13O14921 159 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 GNG7O60262 68 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 PRSS12P56730 875 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 OR9G1Q8NH87 305 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms