RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RGS11O94810 467 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 IGKV1D-33P01593 117 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 IGKV1-33P01594 117 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 CD37P11049 281 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 REG1BP48304 166 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 HNF4GQ14541 408 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 SSX1Q16384 188 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 TMEM95Q3KNT9 176 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 Q6ZS46 218 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 OR51D1Q8NGF3 324 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 MRPL30Q8TCC3 161 aaKnown RBP8.95□□□□□ -0.98
RFFL-204ENST00000414419 FCGR1BQ92637 280 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 GALMQ96C23 342 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 MBNL3Q9NUK0 354 aaKnown RBP8.95□□□□□ -0.98
RFFL-204ENST00000414419 NDUFB11Q9NX14 153 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 TRRAPQ9Y4A5 3859 aa8.95□□□□□ -0.98
RFFL-204ENST00000414419 TRAV1-2A0A0B4J238 106 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 TRDV1A0A1B0GX56 115 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 TXNL1O43396 289 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 TSPAN15O95858 294 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 CD28P10747 220 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 PSMB9P28065 219 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 CLDN12P56749 244 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 QRFPP83859 136 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 HTD2P86397 168 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 NSUN5P1Q3KNT7 163 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 C2orf76Q3KRA6 126 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 MORN2Q502X0 79 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 HES5Q5TA89 166 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 STEAP3Q658P3 488 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
RFFL-204ENST00000414419 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
RFFL-204ENST00000414419 TGIF2LXQ8IUE1 241 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 SPARTQ8N0X7 666 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 LYG1Q8N1E2 194 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 OR2T10Q8NGZ9 312 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 RTN4IP1Q8WWV3 396 aaPredicted RBP8.94□□□□□ -0.98
RFFL-204ENST00000414419 FAM3DQ96BQ1 224 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 GFI1Q99684 422 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 WNT10AQ9GZT5 417 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 LPAR5Q9H1C0 372 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 RIMS4Q9H426 269 aaPredicted RBP8.94□□□□□ -0.98
RFFL-204ENST00000414419 STEAP1Q9UHE8 339 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 JPT1Q9UK76 154 aa8.94□□□□□ -0.98
RFFL-204ENST00000414419 IGHV3-72A0A0B4J1Y9 119 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 SH2D7A6NKC9 451 aaPredicted RBP8.93□□□□□ -0.98
RFFL-204ENST00000414419 NCBP2LA6PVI3 153 aaKnown RBP8.93□□□□□ -0.98
RFFL-204ENST00000414419 SLC31A2O15432 143 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 SOCS1O15524 211 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 RAB3BP20337 219 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 GALP22466 123 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 VEGFCP49767 419 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 ZNF134P52741 427 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 MRPS15P82914 257 aaKnown RBP8.93□□□□□ -0.98
RFFL-204ENST00000414419 CT45A1Q5HYN5 189 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 HIST2H2BDQ6DRA6 164 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 MOB1BQ7L9L4 216 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 NDUFA11Q86Y39 141 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 ZNF439Q8NDP4 499 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 OR5AU1Q8NGC0 362 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 OR52L2PQ8NGH6 319 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 OR56B1Q8NGI3 324 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 CT45A3Q8NHU0 189 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 IL1F10Q8WWZ1 152 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 RAB22AQ9UL26 194 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 HSF4Q9ULV5 492 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 MGAT4AQ9UM21 535 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 VWFP04275 2813 aa8.93□□□□□ -0.98
RFFL-204ENST00000414419 PLXNB1O43157 2135 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 A0A0A6YYD4 124 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 FGF16O43320 207 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 YPEL1O60688 119 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 NAPSAO96009 420 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 MOSP00540 346 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 AMY1AP04745 511 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 AMY2AP04746 511 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 CD1BP29016 333 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 PPP1CCP36873 323 aaKnown RBP8.92□□□□□ -0.98
RFFL-204ENST00000414419 GNMTQ14749 295 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 HMGN3Q15651 99 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 FBLN7Q53RD9 439 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 UBE2UQ5VVX9 321 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 C22orf42Q6IC83 251 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 CD200R1LQ6Q8B3 271 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 IZUMO1Q8IYV9 350 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 FAM89BQ8N5H3 189 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 OR2AK2Q8NG84 335 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 OR4F17Q8NGA8 305 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 OR4X2Q8NGF9 303 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 ST6GALNAC6Q969X2 333 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 R3HDM4Q96D70 268 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
RFFL-204ENST00000414419 YPEL2Q96QA6 119 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 OR4F4Q96R69 305 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
RFFL-204ENST00000414419 CMSS1Q9BQ75 279 aaKnown RBP8.92□□□□□ -0.98
RFFL-204ENST00000414419 AK3Q9UIJ7 227 aa8.92□□□□□ -0.98
RFFL-204ENST00000414419 RRP15Q9Y3B9 282 aaKnown RBP8.92□□□□□ -0.98
RFFL-204ENST00000414419 TMEM272A0A1B0GTI8 110 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms