RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ACTR3CQ9C0K3 210 aaPredicted RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 WNT16Q9UBV4 365 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 A0A1B0GV90 55 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 HSPB6O14558 160 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 IGKV1-39P01597 117 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 IGKV1D-39P04432 117 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 P04436 131 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 METTL15P1P0C7V9 234 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 COX5BP10606 129 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 CEACAM6P40199 344 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 TMEM241Q24JQ0 296 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 LILRB2Q8N423 598 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 PSMF1Q92530 271 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 NOL4LQ96MY1 436 aaPredicted RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 SMIM7Q9BQ49 75 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 PRO1933Q9H354 126 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 ERRFI1Q9UJM3 462 aaPredicted RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 TMEM250H0YL14 139 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 ZNF737O75373 536 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 KBTBD11O94819 623 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 IAPPP10997 89 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 Q3ZCU0 254 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 SPEM1Q8N4L4 309 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 C2orf88Q9BSF0 95 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 PHF7Q9BWX1 381 aaPredicted RBP15□□□□□ -0.01
SDCBP-202ENST00000413219 LINC00470Q9BZP3 86 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 RBKSQ9H477 322 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 PRSS50Q9UI38 385 aa15□□□□□ -0.01
SDCBP-202ENST00000413219 MRPS18CQ9Y3D5 142 aaKnown RBP15□□□□□ -0.01
SDCBP-202ENST00000413219 FAM90A26D6RGX4 464 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 AMBPP02760 352 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 MEF2BQ02080 365 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 C20orf204Q6ZNR8 217 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 C16orf82Q7Z2V1 217 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 OR2Y1Q8NGV0 311 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 TAF15Q92804 592 aaKnown RBP eCLIP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 APOBEC3DQ96AK3 386 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 HIST1H2AAQ96QV6 131 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 CRIM1Q9NZV1 1036 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 CABIN1Q9Y6J0 2220 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 A0A0G2JMM0 328 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 A0A1W2PPB8 328 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 A0A1W2PRS3 328 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 ARGFXA6NJG6 315 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 KIR3DP1A8MWS1 328 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 SS18L1O75177 396 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 IGKV1-5P01602 117 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 COL10A1Q03692 680 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 ADIRFQ15847 76 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 BSXQ3C1V8 233 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 TCEAL6Q6IPX3 200 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 RAB24Q969Q5 203 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 ACY3Q96HD9 319 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 OR4C12Q96R67 309 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 SLC39A9Q9NUM3 307 aa14.99□□□□□ -0.01
SDCBP-202ENST00000413219 SPTBN5Q9NRC6 3674 aaKnown RBP14.99□□□□□ -0.01
SDCBP-202ENST00000413219 ST8SIA5O15466 376 aa14.98□□□□□ -0.01
SDCBP-202ENST00000413219 GZMBP10144 247 aa14.98□□□□□ -0.01
SDCBP-202ENST00000413219 IZUMO4Q1ZYL8 232 aa14.98□□□□□ -0.01
SDCBP-202ENST00000413219 OR51G1Q8NGK1 321 aa14.98□□□□□ -0.01
SDCBP-202ENST00000413219 LHX4Q969G2 390 aa14.98□□□□□ -0.01
SDCBP-202ENST00000413219 LIN7CQ9NUP9 197 aaKnown RBP14.98□□□□□ -0.01
SDCBP-202ENST00000413219 TNRC6AQ8NDV7 1962 aaKnown RBP14.97□□□□□ -0.01
SDCBP-202ENST00000413219 TRAV24A0A0B4J272 114 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 LRRC3CA6NJW4 275 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 SYNGR1O43759 233 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 GCGP01275 180 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 JMJD7P0C870 316 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 PDLIM4P50479 330 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 UNQ6494/PRO21346Q6UXR6 183 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 MOB1BQ7L9L4 216 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 SAP25Q8TEE9 199 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 OR5B12Q96R08 314 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 GAB2Q9UQC2 676 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 IGKV3D-15A0A087WSY6 115 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 A8MWP6 167 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 H7BYZ3 331 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 IGLV2-14P01704 120 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 RNF224P0DH78 156 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 APLNRP35414 380 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 FAM3BP58499 235 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-202ENST00000413219 ARF1P84077 181 aaKnown RBP14.97□□□□□ -0.01
SDCBP-202ENST00000413219 ABHD3Q8WU67 409 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 TMEM9BQ9NQ34 198 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 PRDM6Q9NQX0 595 aa14.97□□□□□ -0.01
SDCBP-202ENST00000413219 PPP5D1E7EU14 171 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 PSMB3P49720 205 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 RPL23P62829 140 aaKnown RBP14.96□□□□□ -0.01
SDCBP-202ENST00000413219 SLC38A11Q08AI6 406 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 WIPI1Q5MNZ9 446 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-202ENST00000413219 ZNF573Q86YE8 665 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 BEND2Q8NDZ0 799 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 TMEM170AQ8WVE7 144 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 OR5P3Q8WZ94 311 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 DLL3Q9NYJ7 618 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 LAMP3Q9UQV4 416 aa14.96□□□□□ -0.01
SDCBP-202ENST00000413219 C5orf49A4QMS7 147 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 OR5B21A6NL26 309 aa14.96□□□□□ -0.02
SDCBP-202ENST00000413219 GDF9O60383 454 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms