RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SPTAN1Q13813 2472 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 TRBV23-1A0A0A0MS06 115 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 IGHV3-43A0A0B4J1X8 118 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 KBTBD11-OT1A0A1B0GTJ5 212 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 C9orf170A2RU37 121 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 HMX3A6NHT5 357 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 CRYM-AS1A6NIL9 109 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 ZNF729A6NN14 1252 aaPredicted RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 SSNA1O43805 119 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 IGHV3-43DP0DP04 118 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 AKR1C4P17516 323 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 VAMP1P23763 118 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 COL8A1P27658 744 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 GNRHRP30968 328 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 PPP1CCP36873 323 aaKnown RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 CEACAM6P40199 344 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 PIGPP57054 158 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 SUPT4H1P63272 117 aaKnown RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 DHODHQ02127 395 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 FCN2Q15485 313 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 TMEM30BQ3MIR4 351 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 ABCA11PQ4W5N1 156 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 TMEM128Q5BJH2 165 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 CD276Q5ZPR3 534 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 FAM53AQ6NSI3 398 aaPredicted RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 ZNF818PQ6ZRF7 136 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 NLRC3Q7RTR2 1065 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 LYG2Q86SG7 212 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 FAM185AQ8N0U4 392 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 OR10V1Q8NGI7 309 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 RFESDQ8TAC1 157 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 SECTM1Q8WVN6 248 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 H1FXQ92522 213 aaKnown RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 NRGNQ92686 78 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 NINJ1Q92982 152 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 NEIL1Q96FI4 390 aaPredicted RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 NEURL2Q9BR09 285 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 MED28Q9H204 178 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 GAL3ST2Q9H3Q3 398 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 LINC00574Q9H8X3 128 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 RAB9BQ9NP90 201 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 OR2S2Q9NQN1 319 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 SLC2A9Q9NRM0 540 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 TAS2R3Q9NYW6 316 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 CLN8Q9UBY8 286 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 MIOXQ9UGB7 285 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 DCHS2Q6V1P9 2916 aa5.49□□□□□ -1.53
VPS41-204ENST00000413141 USP9YO00507 2555 aaPredicted RBP5.49□□□□□ -1.53
VPS41-204ENST00000413141 DSCAML1Q8TD84 2053 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 GPR31O00270 319 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 HSD17B6O14756 317 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 SFT2D2O95562 160 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 DUS4LO95620 317 aaKnown RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 WNT2P09544 360 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 SULT1A3P0DMM9 295 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 SULT1A4P0DMN0 295 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PAX1P15863 534 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 CCL3L1P16619 93 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 OMGP23515 440 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 CD34P28906 385 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 SSTR2P30874 369 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PDLIM4P50479 330 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 LUMP51884 338 aaPredicted RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 LOXL3P58215 753 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 RND3P61587 244 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 CD300CQ08708 224 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 LTC4SQ16873 150 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PHLDA2Q53GA4 152 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PRAMEF5Q5TYX0 476 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 WDR25Q64LD2 544 aaPredicted RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 TMEM200BQ69YZ2 307 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 ZNF787Q6DD87 383 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 LPCAT3Q6P1A2 487 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 CCDC71LQ8N9Z2 235 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 BVESQ8NE79 360 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 OR11H7Q8NGC8 314 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 FAM216AQ8WUB2 273 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 MITD1Q8WV92 249 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 RTN4IP1Q8WWV3 396 aaPredicted RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 ZNF714Q96N38 554 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PSMG3-AS1Q96PY0 264 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 BPESC1Q9GZL8 116 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 SLC5A7Q9GZV3 580 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 OR2D2Q9H210 308 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 NARFLQ9H6Q4 476 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 NAA60Q9H7X0 242 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 PATZ1Q9HBE1 687 aaKnown RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 BARX1Q9HBU1 254 aaPredicted RBP5.48□□□□□ -1.53
VPS41-204ENST00000413141 CCL28Q9NRJ3 127 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 GFOD1Q9NXC2 390 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 IDI2-AS1Q9NZ38 188 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 GNG12Q9UBI6 72 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 KCNS2Q9ULS6 477 aa5.48□□□□□ -1.53
VPS41-204ENST00000413141 FBN2P35556 2912 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 A8MV72 311 aaPredicted RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 C22orf46C9J442 243 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ST8SIA5O15466 376 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 YPEL1O60688 119 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms