RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 OR2V2Q96R30 315 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 OR4F4Q96R69 305 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 WSB1Q9Y6I7 421 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 PLXNA2O75051 1894 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 A0A1W2PPH5 198 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 WNT9BO14905 357 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF708P17019 499 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 NTF3P20783 257 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 DVL1P1P54792 670 aaPredicted RBP9.62□□□□□ -0.87
PTPRF-204ENST00000412568 H3F3AP84243 136 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 HFEQ30201 348 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 STUMQ69YW2 141 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 V9GYS6 101 aa9.62□□□□□ -0.87
PTPRF-204ENST00000412568 IGKV1-9A0A0C4DH69 117 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 RPL36A-HNRNPH2H7BZ11 118 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 SYNGR3O43761 229 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 CHST1O43916 411 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 YIF1AO95070 293 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 CEACAM1P13688 526 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 HNF1AP20823 631 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 CLDN18P56856 261 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 LRRC10Q5BKY1 277 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 SLC25A53Q5H9E4 307 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 C1orf185Q5T7R7 199 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 NSUN5P2Q63ZY6 315 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 DBX2Q6ZNG2 339 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 ITLN1Q8WWA0 313 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 ABHD14BQ96IU4 210 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 FAM117AQ9C073 453 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 PIPOXQ9P0Z9 390 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 H0Y8G0 127 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 CD3EP07766 207 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 DTYMKP23919 212 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 REG1BP48304 166 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 TMEM50BP56557 158 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 MPV17LQ2QL34 196 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 C5orf66Q9H5L9 145 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 SEMA5BQ9P283 1151 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 OR2H2O95918 312 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 APELAP0DMC3 54 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 ANKRD55Q3KP44 614 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 TMEM211Q6ICI0 200 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 OR52L2PQ8NGH6 319 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 CCL13Q99616 98 aa9.61□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF716A6NP11 495 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 CD74P04233 296 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 PSG2P11465 335 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 SLC25A4P12235 298 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 FGF12P61328 243 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 GNB2P62879 340 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 COL10A1Q03692 680 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF66Q6ZN08 573 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 OR13D1Q8NGV5 346 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 WNT2BQ93097 391 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 OR10C1Q96KK4 312 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 C17orf112F2Z3M2 114 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 TGOLN2O43493 480 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 NAT2P11245 290 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 P2RY4P51582 365 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 UBE2G2P60604 165 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 RTL8BQ17RB0 113 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 AWAT1Q58HT5 328 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 C9orf106Q8NAJ2 232 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
PTPRF-204ENST00000412568 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 C19orf67A6NJJ6 358 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 CDRT15L2A8MXV6 281 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 P2RY6Q15077 328 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 GUCA2BQ16661 112 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 NCR3LG1Q68D85 454 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 ACY3Q96HD9 319 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 Q96M66 194 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 PRRC2CQ9Y520 2896 aaKnown RBP9.6□□□□□ -0.87
PTPRF-204ENST00000412568 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 IGFBP3P17936 291 aaPredicted RBP9.6□□□□□ -0.87
PTPRF-204ENST00000412568 IL3RAP26951 378 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 PRDX2P32119 198 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 COMMD1Q8N668 190 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 BSCL2Q96G97 398 aaPredicted RBP9.6□□□□□ -0.87
PTPRF-204ENST00000412568 BTF3L4Q96K17 158 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 ZNF251Q9BRH9 671 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 SLC35B3Q9H1N7 401 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 OR2W1Q9Y3N9 320 aa9.6□□□□□ -0.87
PTPRF-204ENST00000412568 AP4M1O00189 453 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 TFF1P04155 84 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 TMEM11P17152 192 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 CTRB1P17538 263 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 G6PCP35575 357 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 HLA-DRB3P79483 266 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 CTRB2Q6GPI1 263 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 MOB1BQ7L9L4 216 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 WDYHV1Q96HA8 205 aa9.59□□□□□ -0.87
PTPRF-204ENST00000412568 LYZL4Q96KX0 146 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms