RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ALX4Q9H161 411 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CHCHD3Q9NX63 227 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GMPPBQ9Y5P6 360 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 FAM90A10PA6NDY2 464 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MCRIP1C9JLW8 97 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 LANCL1O43813 399 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF780AO75290 641 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GP9P14770 177 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CNTFRP26992 372 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 BDKRB2P30411 391 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SLURP1P55000 103 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ACTBP60709 375 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RAB40BQ12829 278 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TMEM30BQ3MIR4 351 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 STEAP3Q658P3 488 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OR52I1Q8NGK6 324 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 Q96MT0 163 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF251Q9BRH9 671 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ANKRD60Q9BZ19 345 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SPACA1Q9HBV2 294 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ETAA1Q9NY74 926 aa11.03□□□□□ -0.64
HLA-DQB2-229ENST00000411527 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LINC01619G3V211 115 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RCC1P18754 421 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 BLVRBP30043 206 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RASSF2P50749 326 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ALDH3A2P51648 485 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ADARB1P78563 741 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 DOC2BQ14184 412 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MORN2Q502X0 79 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 XAF1Q6GPH4 301 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LIN54Q6MZP7 749 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RPL22L1Q6P5R6 122 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RHOXF1Q8NHV9 184 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CITED4Q96RK1 184 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ZNF184Q99676 751 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GHITMQ9H3K2 345 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR2S2Q9NQN1 319 aa11.02□□□□□ -0.65
HLA-DQB2-229ENST00000411527 BIRC6Q9NR09 4857 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NBR2O15453 112 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LIMS3P0CW19 117 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LIMS4P0CW20 117 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GPR176Q14439 515 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CCDC58Q4VC31 144 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RAB12Q6IQ22 244 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TRAT1Q6PIZ9 186 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR6Q1Q8NGQ2 317 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 PYDC1Q8WXC3 89 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MRPL20Q9BYC9 149 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TOLLIPQ9H0E2 274 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TAF9BQ9HBM6 251 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RCC2Q9P258 522 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ERGIC3Q9Y282 383 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 PEX16Q9Y5Y5 336 aa11.01□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MAGEA13PA6NCF6 341 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CIB2O75838 187 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RIPK1Q13546 671 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GNMTQ14749 295 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ECSCRQ19T08 205 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ACSM6Q6P461 480 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 C5orf24Q7Z6I8 188 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ODF3L1Q8IXM7 274 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GAPTQ8N292 157 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR52L2PQ8NGH6 319 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CASTOR1Q8WTX7 329 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ARPC1AQ92747 370 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NABP2Q9BQ15 211 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 ABHD14AQ9BUJ0 271 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MRPS18AQ9NVS2 196 aaKnown RBP11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 KIAA1456Q9P272 454 aa11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 RPL36Q9Y3U8 105 aaKnown RBP11□□□□□ -0.65
HLA-DQB2-229ENST00000411527 IGHV4OR15-8A0A075B7B6 117 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 A0A087WW49 117 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 A0A1W2PN81 502 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 UBE2QL1A1L167 161 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 SOX15O60248 233 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CHRNA7P36544 502 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 PPP1CCP36873 323 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 GLIPR1L1Q6UWM5 242 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CBR4Q8N4T8 237 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 NPBQ8NG41 125 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR13C5Q8NGS8 318 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MUL1Q969V5 352 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MRPS24Q96EL2 167 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 OR4C12Q96R67 309 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TM2D3Q9BRN9 247 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 CST11Q9H112 138 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 TPSG1Q9NRR2 321 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 KCNIP1Q9NZI2 227 aa10.99□□□□□ -0.65
HLA-DQB2-229ENST00000411527 MRPS28Q9Y2Q9 187 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms