RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TMEM11P17152 192 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 CLDN12P56749 244 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 C6orf183Q5T699 404 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 C5orf56Q8N8D9 126 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 OR6M1Q8NGM8 313 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 RTN4IP1Q8WWV3 396 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-202ENST00000411423 AKR1E2Q96JD6 320 aa15.13■□□□□ 0.01
SF3A1-202ENST00000411423 SLC17A2O00624 439 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 SOCS1O15524 211 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 SPINT2O43291 252 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 CA11O75493 328 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 BPNT1O95861 308 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 CALRP27797 417 aaKnown RBP15.12■□□□□ 0.01
SF3A1-202ENST00000411423 EMX1Q04741 257 aaPredicted RBP15.12■□□□□ 0.01
SF3A1-202ENST00000411423 EBI3Q14213 229 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 HES1Q14469 280 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 TRAM1Q15629 374 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 C9orf152Q5JTZ5 239 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 ZNF367Q7RTV3 350 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 MOB3BQ86TA1 216 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 Q8N6K4 173 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 OR5AU1Q8NGC0 362 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 KCNG3Q8TAE7 436 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 GNG12Q9UBI6 72 aa15.12■□□□□ 0.01
SF3A1-202ENST00000411423 GAPDHP04406 335 aaKnown RBP15.11■□□□□ 0.01
SF3A1-202ENST00000411423 PPP1CCP36873 323 aaKnown RBP15.11■□□□□ 0.01
SF3A1-202ENST00000411423 ZNF137PP52743 207 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 CD83Q01151 205 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 HMGN3Q15651 99 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 Q3ZCU0 254 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 MORN2Q502X0 79 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 NDUFA11Q86Y39 141 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 OR51D1Q8NGF3 324 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 EAF1Q96JC9 268 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-202ENST00000411423 NEDD4LQ96PU5 975 aa15.11■□□□□ 0.01
SF3A1-202ENST00000411423 HDHD3Q9BSH5 251 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-202ENST00000411423 LINC01548A6NM66 108 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 G3V4G9 280 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 H3BUI4 141 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 PEX14O75381 377 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 NAPSAO96009 420 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 OPN1MWP04001 364 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 OPN1MW2P0DN77 364 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 OPN1MW3P0DN78 364 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 PSMA1P25786 263 aaKnown RBP15.1■□□□□ 0.01
SF3A1-202ENST00000411423 BLVRBP30043 206 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-202ENST00000411423 TMEM50BP56557 158 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 OR10A3P58181 314 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 ZNF880Q6PDB4 577 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 TRAT1Q6PIZ9 186 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 ODF3L1Q8IXM7 274 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 IZUMO1Q8IYV9 350 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 FAM89BQ8N5H3 189 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 PLGRKTQ9HBL7 147 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 OR2S2Q9NQN1 319 aa15.1■□□□□ 0.01
SF3A1-202ENST00000411423 NOTCH1P46531 2555 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 A0A1W2PRX2 142 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 LDLRAD4O15165 306 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 ARL6IP5O75915 188 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 RAB11BQ15907 218 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 HES5Q5TA89 166 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 CD200R1LQ6Q8B3 271 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 OR2W3Q7Z3T1 314 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 CENPVQ7Z7K6 275 aaPredicted RBP15.09■□□□□ 0.01
SF3A1-202ENST00000411423 SVOPQ8N4V2 548 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 NOL4LQ96MY1 436 aaPredicted RBP15.09■□□□□ 0.01
SF3A1-202ENST00000411423 PLSCR3Q9NRY6 295 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 NDUFB11Q9NX14 153 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 AK3Q9UIJ7 227 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 LINC00527Q9UJ94 153 aa15.09■□□□□ 0.01
SF3A1-202ENST00000411423 DNAH3Q8TD57 4116 aa15.08■□□□□ 0.01
SF3A1-202ENST00000411423 M0QZK8 103 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 ARSBP15848 533 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 GABARAPL2P60520 117 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 C2orf76Q3KRA6 126 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 TMEM30BQ3MIR4 351 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 NR2C2APQ86WQ0 139 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 SPARTQ8N0X7 666 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 Q8N9W7 124 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 PARP12Q9H0J9 701 aaKnown RBP15.08■□□□□ 0
SF3A1-202ENST00000411423 JPT1Q9UK76 154 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 BLOC1S6Q9UL45 172 aa15.08■□□□□ 0
SF3A1-202ENST00000411423 TMEM272A0A1B0GTI8 110 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 FGF16O43320 207 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 DENRO43583 198 aaKnown RBP15.07■□□□□ 0
SF3A1-202ENST00000411423 HTD2P86397 168 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 PDLIM3Q53GG5 364 aaPredicted RBP15.07■□□□□ 0
SF3A1-202ENST00000411423 PLAC9Q5JTB6 97 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 ZNF554Q86TJ5 538 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 ZNF329Q86UD4 541 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 TGIF2LXQ8IUE1 241 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 FAM3DQ96BQ1 224 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 R3HDM4Q96D70 268 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 KCNIP1Q9NZI2 227 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 V9GY05 133 aa15.07■□□□□ 0
SF3A1-202ENST00000411423 A0A0B4J203 849 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 PLXNB1O43157 2135 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 YPEL1O60688 119 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 IL3RAP26951 378 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 CD1BP29016 333 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms