RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ELF5Q9UKW6 265 aaPredicted RBP18.03■□□□□ 0.48
PTCD3-203ENST00000409783 SERPINE3A8MV23 424 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 SLC31A2O15432 143 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 HKR1P10072 659 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 RPL5P46777 297 aaKnown RBP18.02■□□□□ 0.48
PTCD3-203ENST00000409783 RAB13P51153 203 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 ZNF134P52741 427 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 GNMTQ14749 295 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 OR52L2PQ8NGH6 319 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 OR10V1Q8NGI7 309 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 CREB3L1Q96BA8 519 aa18.02■□□□□ 0.48
PTCD3-203ENST00000409783 DNHD1Q96M86 4753 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 A0A075B6Q4 140 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 BTBD17A6NE02 478 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 CD3GP09693 182 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 ACTG1P63261 375 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 DIAPH2-AS1Q14236 149 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 CDNFQ49AH0 187 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 MORN2Q502X0 79 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 SETD6Q8TBK2 473 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 GALMQ96C23 342 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 OCSTAMPQ9BR26 566 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 OR2S2Q9NQN1 319 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 GNG12Q9UBI6 72 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 JPT1Q9UK76 154 aa18.01■□□□□ 0.47
PTCD3-203ENST00000409783 AMMECR1Q9Y4X0 333 aaPredicted RBP18.01■□□□□ 0.47
PTCD3-203ENST00000409783 SCGNO76038 276 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 FCGR3AP08637 254 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 CEACAM3P40198 252 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 RPL15P61313 204 aaKnown RBP18■□□□□ 0.47
PTCD3-203ENST00000409783 HLA-DRB3P79483 266 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 RELBQ01201 579 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 LY6EQ16553 131 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 ZNF260Q3ZCT1 412 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 CT45A1Q5HYN5 189 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 LY6G6FQ5SQ64 297 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 CCBE1Q6UXH8 406 aaPredicted RBP18■□□□□ 0.47
PTCD3-203ENST00000409783 SLC25A48Q6ZT89 311 aaKnown RBP18■□□□□ 0.47
PTCD3-203ENST00000409783 CT45A3Q8NHU0 189 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 ABCG5Q9H222 651 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 MGAT4AQ9UM21 535 aa18■□□□□ 0.47
PTCD3-203ENST00000409783 OOSP1A8MZH6 123 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 YPEL1O60688 119 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 SCTP09683 121 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 PPP1CCP36873 323 aaKnown RBP17.99■□□□□ 0.47
PTCD3-203ENST00000409783 COMPP49747 757 aaPredicted RBP17.99■□□□□ 0.47
PTCD3-203ENST00000409783 MADCAM1Q13477 382 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 ARL6IP1Q15041 203 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 ST6GALNAC6Q969X2 333 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 KCTD12Q96CX2 325 aaKnown RBP17.99■□□□□ 0.47
PTCD3-203ENST00000409783 YPEL2Q96QA6 119 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 DCSTAMPQ9H295 470 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 C1RLQ9NZP8 487 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 TCF19Q9Y242 345 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 STAB1Q9NY15 2570 aa17.99■□□□□ 0.47
PTCD3-203ENST00000409783 IGKV1-6A0A0C4DH72 117 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 A6NDX4 124 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 GSTP1P09211 210 aaKnown RBP17.98■□□□□ 0.47
PTCD3-203ENST00000409783 HACD4Q5VWC8 232 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 STEAP3Q658P3 488 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 CLVS1Q8IUQ0 354 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-203ENST00000409783 OR10X1Q8NGY0 326 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 SPATA3Q8NHX4 192 aa17.98■□□□□ 0.47
PTCD3-203ENST00000409783 GCDHQ92947 438 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-203ENST00000409783 A0A0A6YYH2 397 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 A0A1W2PPI3 338 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 TMEM235A6NFC5 223 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 A6NJ64 397 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 TRDCB7Z8K6 153 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 CHST1O43916 411 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 ZNF137PP52743 207 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 HERPUD1Q15011 391 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 FBLN7Q53RD9 439 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 IL1F10Q8WWZ1 152 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 TOMM40LQ969M1 308 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 RPEQ96AT9 228 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 ABCB10Q9NRK6 738 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 ZNF230Q9UIE0 474 aaPredicted RBP17.97■□□□□ 0.47
PTCD3-203ENST00000409783 TENM1Q9UKZ4 2725 aa17.97■□□□□ 0.47
PTCD3-203ENST00000409783 SSX5O60225 188 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 MRPS15P82914 257 aaKnown RBP17.96■□□□□ 0.47
PTCD3-203ENST00000409783 ZNF816Q0VGE8 651 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-203ENST00000409783 ARFRP1Q13795 201 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 SPCS2Q15005 226 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 SRSF7Q16629 238 aaKnown RBP eCLIP17.96■□□□□ 0.47
PTCD3-203ENST00000409783 UBE2NLQ5JXB2 153 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 Q6ZS49 121 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 SAMD12Q8N8I0 201 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 MAFIPQ8WZ33 124 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 CFHR4Q92496 578 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 PARP12Q9H0J9 701 aaKnown RBP17.96■□□□□ 0.47
PTCD3-203ENST00000409783 OR1A1Q9P1Q5 309 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 SCOCQ9UIL1 159 aa17.96■□□□□ 0.47
PTCD3-203ENST00000409783 TRAV18A0A075B6X5 111 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 IGKV1D-8A0A087WSZ0 117 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 FAM90A9PA6NNJ1 464 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 NDUFA7O95182 113 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 DTYMKP23919 212 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 CD24P25063 80 aa17.95■□□□□ 0.46
PTCD3-203ENST00000409783 RORCP51449 518 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms