RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TOX4O94842 621 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 SCTP09683 121 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 GSTT2P0CG29 244 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 TBPP20226 339 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 PRTN3P24158 256 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 GDNFP39905 211 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 OR3A3P47888 321 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 INPP1P49441 399 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 TAS2R19P59542 299 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 PRAMEF5Q5TYX0 476 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 OR1L1Q8NH94 360 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 CABLES2Q9BTV7 478 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 TMPRSS13Q9BYE2 586 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 SIRPDQ9H106 197 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 C7orf69Q9H7B7 122 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 JPT1Q9UK76 154 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 AUP1Q9Y679 476 aa13.53□□□□□ -0.24
TSPAN4-208ENST00000409531 IGKV1D-8A0A087WSZ0 117 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 ZNF736B4DX44 427 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 SDCBPO00560 298 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 HSPA12AO43301 675 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 RGS11O94810 467 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 AVPP01185 164 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 OMGP23515 440 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 ZBTB25P24278 435 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 NFYBP25208 207 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 CDK10Q15131 360 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 C11orf42Q8N5U0 333 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 Q8N7P7 452 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 TMEM229BQ8NBD8 167 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 OR5H2Q8NGV7 314 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 OR10J5Q8NHC4 309 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 UBALD1Q8TB05 177 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 DEDD2Q8WXF8 326 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 HEXA-AS1Q9H8Q6 139 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 OR2S2Q9NQN1 319 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 GNG12Q9UBI6 72 aa13.52□□□□□ -0.25
TSPAN4-208ENST00000409531 BET1O15155 118 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 FCER2P06734 321 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 MMP9P14780 707 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 HLA-DMAP28067 261 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 LTC4SQ16873 150 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 Q3ZCU0 254 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 C1orf229Q6ZS94 237 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 VMO1Q7Z5L0 202 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 LYSMD2Q8IV50 215 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 TOMM5Q8N4H5 51 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 OR13D1Q8NGV5 346 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 SDHCQ99643 169 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 GINS4Q9BRT9 223 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 PCGF1Q9BSM1 259 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 TMEM133Q9H2Q1 129 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 GFOD1Q9NXC2 390 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 SLC23A1Q9UHI7 598 aa13.51□□□□□ -0.25
TSPAN4-208ENST00000409531 MXRA5Q9NR99 2828 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 A0A087X0M5 115 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 TRBV6-7A0A0A0MS04 114 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 A0A1B0GX30 115 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 LANCL1O43813 399 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 YPEL1O60688 119 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 MMP23AO75900 390 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 HRH1P35367 487 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 LOXL3P58215 753 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 BAK1Q16611 211 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 IGSF11Q5DX21 431 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 RNASE10Q5GAN6 216 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 ATRQ13535 2644 aa13.5□□□□□ -0.25
TSPAN4-208ENST00000409531 IGKV1-6A0A0C4DH72 117 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 CD3DP04234 171 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 IFNA6P05013 189 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 AKAIN1P0CW23 69 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 OR5H8P0DN80 308 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 IL7P13232 177 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 CD34P28906 385 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 MEF2DQ14814 521 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 LY6G6FQ5SQ64 297 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 ZNF57Q68EA5 555 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 OVCH2Q7RTZ1 564 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 EDARADDQ8WWZ3 215 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 UPRTQ96BW1 309 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 SUCNR1Q9BXA5 334 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 SIRT7Q9NRC8 400 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 EHFQ9NZC4 300 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 ZNF69Q9UC07 566 aa13.49□□□□□ -0.25
TSPAN4-208ENST00000409531 IGHV3-43A0A0B4J1X8 118 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 J3QRK9 145 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 RAB3DO95716 219 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 PMP2P02689 132 aa13.48□□□□□ -0.25
TSPAN4-208ENST00000409531 CD74P04233 296 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms