RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TUSC2O75896 110 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 TK1P04183 234 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 OR2B8PP59922 312 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 ADAM5Q6NVV9 412 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 PKIBQ9C010 78 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
SCAMP4-202ENST00000409472 MLNRO43193 412 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 COX5AP20674 150 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 UCP2P55851 309 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 KIRREL1Q96J84 757 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 PLSCR2Q9NRY7 297 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 A0A1W2PR64 198 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 NKX2-6A6NCS4 301 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 CD5P06127 495 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 GRPP07492 148 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 TMEM33P57088 247 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 MST1LQ2TV78 715 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF826PQ6ZT77 177 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 LGI3Q8N145 548 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 PRR18Q8N4B5 295 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 KLF14Q8TD94 323 aaPredicted RBP12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 PARP12Q9H0J9 701 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 GLRX2Q9NS18 164 aa12.86□□□□□ -0.35
SCAMP4-202ENST00000409472 CXorf65A6NEN9 183 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 TNFSF13O75888 250 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 NXPH3O95157 252 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 OR2H2O95918 312 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 PCP4P48539 62 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 TGIF2LXQ8IUE1 241 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 IL1F10Q8WWZ1 152 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 POM121Q96HA1 1249 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 TMEM222Q9H0R3 208 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 CADP27708 2225 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 PRR33A8MZF0 331 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 WNT9BO14905 357 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 FBXO24O75426 580 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 CEACAM4O75871 244 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 IGKV3-15P01624 115 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 CECR9P0C854 216 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 ID4P47928 161 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 ASCL1P50553 236 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 ERVK11-1P61568 191 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 IL13RA2Q14627 380 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 WFDC1Q9HC57 220 aa12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 RCL1Q9Y2P8 373 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-202ENST00000409472 KIR2DS1A0A191URI9 304 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 C7orf77A4D0Y5 90 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 LRP5LA4QPB2 252 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 DEGS1O15121 323 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 WDR1O75083 606 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 AKR1C3P42330 323 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 KIR2DS4P43632 304 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 DVL1P1P54792 670 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 HLA-DRB3P79483 266 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 KIR2DS1Q14954 304 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 AWAT1Q58HT5 328 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 ETV3LQ6ZN32 361 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 MRPL37Q9BZE1 423 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 IQCF6A8MYZ5 107 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 YIF1AO95070 293 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 LPAR6P43657 344 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 EIF5AP63241 154 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 INO80CQ6PI98 192 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 IGF2-ASQ6U949 168 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 HEATR1Q9H583 2144 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 SPACA1Q9HBV2 294 aa12.84□□□□□ -0.35
SCAMP4-202ENST00000409472 ZNF891A8MT65 544 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 PGA5P0DJD9 388 aa12.83□□□□□ -0.36
SCAMP4-202ENST00000409472 RAC2P15153 192 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms