RNA–Protein interactions for RNA: ENST00000403076.5

SDC1-203, Transcript of syndecan 1, humanhuman

TSL 1 (best) BASIC

Gene SDC1, Length 1,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-203ENST00000403076 CYB5R2Q6BCY4 276 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 GLCCI1Q86VQ1 547 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 KIR3DL3Q8N743 410 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 OR56B4Q8NH76 319 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 DACT3Q96B18 629 aaPredicted RBP14.83□□□□□ -0.04
SDC1-203ENST00000403076 TMEM186Q96B77 213 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 C7orf50Q9BRJ6 194 aaKnown RBP14.83□□□□□ -0.04
SDC1-203ENST00000403076 SUCNR1Q9BXA5 334 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 HIF1ANQ9NWT6 349 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 ZNF69Q9UC07 566 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 JPT1Q9UK76 154 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 KPTNQ9Y664 436 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 SESN1Q9Y6P5 492 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 MAP1AP78559 2803 aaPredicted RBP14.83□□□□□ -0.04
SDC1-203ENST00000403076 WNK2Q9Y3S1 2297 aa14.83□□□□□ -0.04
SDC1-203ENST00000403076 FAM172BPA6NC97 362 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 LYRM1O43325 122 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 RGS11O94810 467 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 DIRAS3O95661 229 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 RBP4P02753 201 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 IGHV1-8P0DP01 117 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 NFYAP23511 347 aaPredicted RBP14.82□□□□□ -0.04
SDC1-203ENST00000403076 PPP1CCP36873 323 aaKnown RBP14.82□□□□□ -0.04
SDC1-203ENST00000403076 SCGB2B2Q4G0G5 96 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 C1orf122Q6ZSJ8 110 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 C11orf42Q8N5U0 333 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 OR52M1Q8NGK5 317 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 OR6F1Q8NGZ6 308 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 SLC6A7Q99884 636 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 TMPRSS13Q9BYE2 586 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 METTL8Q9H825 291 aaKnown RBP14.82□□□□□ -0.04
SDC1-203ENST00000403076 GFOD1Q9NXC2 390 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 CREBBPQ92793 2442 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 NAP1L6A6NFF2 107 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 PLA2G10O15496 165 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 TOX4O94842 621 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 IGHV3-7P01780 117 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 FCGR2CP31995 323 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 GNMTQ14749 295 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 MZT2BQ6NZ67 158 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 FAHD2BQ6P2I3 314 aaPredicted RBP14.82□□□□□ -0.04
SDC1-203ENST00000403076 ARRDC1Q8N5I2 433 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 Q8N7P7 452 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 ZFAND2BQ8WV99 257 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 FAHD2AQ96GK7 314 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 ZNF2Q9BSG1 426 aaPredicted RBP14.82□□□□□ -0.04
SDC1-203ENST00000403076 PCGF1Q9BSM1 259 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 SIRT7Q9NRC8 400 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 RDH8Q9NYR8 311 aa14.82□□□□□ -0.04
SDC1-203ENST00000403076 MYO9AB2RTY4 2548 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 ABCA2Q9BZC7 2435 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 LOXL3P58215 753 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 ASAH1Q13510 395 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 MORN2Q502X0 79 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 FAM53AQ6NSI3 398 aaPredicted RBP14.81□□□□□ -0.04
SDC1-203ENST00000403076 H1FOOQ8IZA3 346 aaPredicted RBP14.81□□□□□ -0.04
SDC1-203ENST00000403076 POC5Q8NA72 575 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 OR51S1Q8NGJ8 323 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 LEAP2Q969E1 77 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 C11orf54Q9H0W9 315 aaPredicted RBP14.81□□□□□ -0.04
SDC1-203ENST00000403076 TMEM133Q9H2Q1 129 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 SCP2D1Q9UJQ7 156 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 TBC1D24Q9ULP9 559 aa14.81□□□□□ -0.04
SDC1-203ENST00000403076 RBM7Q9Y580 266 aaKnown RBP14.81□□□□□ -0.04
SDC1-203ENST00000403076 CR1P17927 2039 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 YPEL1O60688 119 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 ZNF16P17020 682 aaPredicted RBP14.8□□□□□ -0.04
SDC1-203ENST00000403076 GATA3P23771 443 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 PRTN3P24158 256 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 GNG10P50151 68 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 HERV-K104P61576 105 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 PAX8Q06710 450 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 VMO1Q7Z5L0 202 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 GIMAP1Q8WWP7 306 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 YPEL2Q96QA6 119 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 PRRT1Q99946 306 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 SIRPDQ9H106 197 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 C7orf69Q9H7B7 122 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 HEXA-AS1Q9H8Q6 139 aa14.8□□□□□ -0.04
SDC1-203ENST00000403076 ZNF735P0CB33 412 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 AADACP22760 399 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 COX7A1P24310 79 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 DLX1P56177 255 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 FXYD4P59646 89 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 PRB3Q04118 309 aaPredicted RBP14.79□□□□□ -0.04
SDC1-203ENST00000403076 DHRS11Q6UWP2 260 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 ABHD12Q8N2K0 398 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 EDARADDQ8WWZ3 215 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 OR2W1Q9Y3N9 320 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 AUP1Q9Y679 476 aa14.79□□□□□ -0.04
SDC1-203ENST00000403076 ITPR3Q14573 2671 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 A0A1W2PPE3 182 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 TOR1AO14656 332 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 PPYP01298 95 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 IDO2Q6ZQW0 420 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 PNKDQ8N490 385 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 OR2AK2Q8NG84 335 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 OR13D1Q8NGV5 346 aa14.78□□□□□ -0.04
SDC1-203ENST00000403076 PARP12Q9H0J9 701 aaKnown RBP14.78□□□□□ -0.04
SDC1-203ENST00000403076 PSG11Q9UQ72 335 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms