RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PIGBOS1A0A0B4J2F0 54 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IGSF23A1L1A6 192 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 FAM24AA6NFZ4 105 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 A8MXE2 369 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 UMAD1C9J7I0 102 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SCTP09683 121 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CHRNB4P30926 498 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 FHITP49789 147 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 VAMP2P63027 116 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 C9orf135Q5VTT2 229 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF818PQ6ZRF7 136 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 NEK7Q8TDX7 302 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CLCC1Q96S66 551 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 LYRM2Q9NU23 88 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 MTCH1Q9NZJ7 389 aa13.51□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF98A6NK75 572 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ADAM20O43506 726 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 FOXG1P55316 489 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 POLR2GP62487 172 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 P2RY6Q15077 328 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 RNF212Q495C1 297 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 AWAT1Q58HT5 328 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SHEQ5VZ18 495 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 TMEM182Q6ZP80 229 aaPredicted RBP13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CMTM1Q8IZ96 169 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 FAM213BQ8TBF2 198 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SLC35B3Q9H1N7 401 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CRIM1Q9NZV1 1036 aa13.5□□□□□ -0.25
CHRFAM7A-203ENST00000401522 TRBV6-6A0A0A6YYG2 114 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 H0Y980 276 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HSPA12AO43301 675 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SSSCA1O60232 199 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 MT-ND4LP03901 98 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CCL2P13500 99 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 COX5AP20674 150 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 VDAC1P21796 283 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IGHV1-2P23083 117 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 PTAFRP25105 342 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 PLP2Q04941 152 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 BAXQ07812 192 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 OR5D13Q8NGL4 314 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 LILRB1Q8NHL6 650 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 POM121L2Q96KW2 1035 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IGKV1D-13A0A0B4J2D9 117 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 BTBD17A6NE02 478 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 C1orf196B1AJZ1 125 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IGKV1-13P0DP09 117 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF44P15621 663 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 S100GP29377 79 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 RHEBQ15382 184 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 TMEM252Q8N6L7 170 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 OR2G3Q8NGZ4 309 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 OR5P3Q8WZ94 311 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ESRP2Q9H6T0 727 aaKnown RBP13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 KCNJ16Q9NPI9 418 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 COA4Q9NYJ1 87 aa13.49□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HIVEP3Q5T1R4 2406 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IGKV1-6A0A0C4DH72 117 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 OR5B21A6NL26 309 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 M0R036 132 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SNRNP70P08621 437 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ATP6V0CP27449 155 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 RAB1AP62820 205 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ID3Q02535 119 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 TGFBR3Q03167 851 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CLINT1Q14677 625 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 TSC22D1Q15714 1073 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ETV3LQ6ZN32 361 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF573Q86YE8 665 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SUMF2Q8NBJ7 301 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 MRPL30Q8TCC3 161 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ELOVL5Q9NYP7 299 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 IL36RNQ9UBH0 155 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 MPC1Q9Y5U8 109 aa13.48□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZNF503-AS2A6NEH8 195 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ANKRD30BLA7E2S9 258 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 HSD17B6O14756 317 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SYNGR1O43759 233 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 AGAP20933 346 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ASCL1P50553 236 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CXorf66Q5JRM2 361 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 SFT2D1Q8WV19 159 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CCL28Q9NRJ3 127 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 PPP1CCP36873 323 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 AKR1C3P42330 323 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 GNG3P63215 75 aa13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-203ENST00000401522 ZFP82Q8N141 532 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 487.2 ms