RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 LHFPL1Q86WI0 220 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 WFDC8Q8IUA0 241 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 FGFBP3Q8TAT2 258 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 OR51I2Q9H344 312 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 DANCRP0C864 163 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 DEFA6Q01524 100 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 SCCPDHQ8NBX0 429 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 TMEM45BQ96B21 275 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 LINC00470Q9BZP3 86 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 KIAA1456Q9P272 454 aa15.91■□□□□ 0.14
USP48-204ENST00000400301 OOEPA6NGQ2 149 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 OR5H1A6NKK0 313 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 ACP1P24666 158 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 TPRX1Q8N7U7 411 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 RNF166Q96A37 237 aaPredicted RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 PRRG2O14669 202 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 CRYGSP22914 178 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 G6PCP35575 357 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 DLK1P80370 383 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 SLC16A13Q7RTY0 426 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 C1QTNF5Q9BXJ0 243 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 NGBQ9NPG2 151 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 GAR1Q9NY12 217 aaKnown RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 ZNF407Q9C0G0 2248 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 LNP1A1A4G5 178 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 F8VVB4 439 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 F8VWA3 439 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 CISD2Q8N5K1 135 aaKnown RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 OR10G4Q8NGN3 311 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 OR10G9Q8NGN4 311 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 OR10G7Q8NGN6 311 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 GPR146Q96CH1 333 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 RSG1Q9BU20 258 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 TMEM147Q9BVK8 224 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 LYRM2Q9NU23 88 aaPredicted RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 NTN3O00634 580 aaPredicted RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 ABLIM2Q6H8Q1 611 aa15.9■□□□□ 0.14
USP48-204ENST00000400301 REPIN1Q9BWE0 567 aaKnown RBP15.9■□□□□ 0.14
USP48-204ENST00000400301 SPAARA0A1B0GVQ0 90 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 G3V3Q6 166 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 DNASE2O00115 360 aaPredicted RBP15.89■□□□□ 0.13
USP48-204ENST00000400301 APOA2P02652 100 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 TOLLIPQ9H0E2 274 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 TRGV10A0A0A0MS01 117 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 HNF1AP20823 631 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 UCP2P55851 309 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 ZNF826PQ6ZT77 177 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 OR5D13Q8NGL4 314 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 DTD1Q8TEA8 209 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 BTF3L4Q96K17 158 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 EGLN1Q9GZT9 426 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 IL36RNQ9UBH0 155 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 ZNF98A6NK75 572 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 TGOLN2O43493 480 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 PKIBQ9C010 78 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 IL36GQ9NZH8 169 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 OR1A1Q9P1Q5 309 aa15.89■□□□□ 0.13
USP48-204ENST00000400301 EIF2S3P41091 472 aaKnown RBP15.88■□□□□ 0.13
USP48-204ENST00000400301 TMEM241Q24JQ0 296 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 ETV3LQ6ZN32 361 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 DNM1P46Q6ZS02 220 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 GLRX5Q86SX6 157 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 CYB561D1Q8N8Q1 229 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 FAM210BQ96KR6 192 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 ESPL1Q14674 2120 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 IGKV1-12A0A0C4DH73 117 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 IGKV1D-12P01611 117 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 HIST3H3Q16695 136 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 FAM214BQ7L5A3 538 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 SAMD10Q9BYL1 202 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 PATZ1Q9HBE1 687 aaKnown RBP15.88■□□□□ 0.13
USP48-204ENST00000400301 LRRC3CA6NJW4 275 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 SRSF3P84103 164 aaKnown RBP15.88■□□□□ 0.13
USP48-204ENST00000400301 WDFY1Q8IWB7 410 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 LYG1Q8N1E2 194 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 BOD1Q96IK1 185 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 MTCH1Q9NZJ7 389 aa15.88■□□□□ 0.13
USP48-204ENST00000400301 MMP9P14780 707 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 BMP5P22003 454 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 IFT22Q9H7X7 185 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 TUBD1Q9UJT1 453 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 PINLYPA6NC86 204 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 AP4M1O00189 453 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 NKX2-8O15522 239 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 CEBPDP49716 269 aaPredicted RBP15.87■□□□□ 0.13
USP48-204ENST00000400301 ATP6V1FQ16864 119 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 NCMAPQ5T1S8 102 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 ABHD14BQ96IU4 210 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 SMIM8Q96KF7 97 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 CARHSP1Q9Y2V2 147 aaKnown RBP15.87■□□□□ 0.13
USP48-204ENST00000400301 KIAA1549LQ6ZVL6 1849 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 HOXA6P31267 233 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 RTL8BQ17RB0 113 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 MARS2Q96GW9 593 aaKnown RBP15.87■□□□□ 0.13
USP48-204ENST00000400301 TMEM210A6NLX4 147 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 FGF16O43320 207 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 SOX15O60248 233 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 NSUN5P2Q63ZY6 315 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 OR5P3Q8WZ94 311 aa15.87■□□□□ 0.13
USP48-204ENST00000400301 R3HDM4Q96D70 268 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms