RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 SEC11BP0C7V7 166 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 CA6P23280 308 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 SRD5A2P31213 254 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 MESP2Q0VG99 397 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 COA4Q9NYJ1 87 aa7.78□□□□□ -1.16
PTPRM-202ENST00000400053 YBX2Q9Y2T7 364 aaKnown RBP7.78□□□□□ -1.16
PTPRM-202ENST00000400053 IGHV3-43A0A0B4J1X8 118 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 IGHV3-43DP0DP04 118 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 CCL2P13500 99 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 LRRC75BQ2VPJ9 315 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 CYB561D1Q8N8Q1 229 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 NFAM1Q8NET5 270 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 OR1B1Q8NGR6 318 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 CCL17Q92583 94 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 TBX15Q96SF7 602 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 SCN3AQ9NY46 2000 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 CCDC88CQ9P219 2028 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 IGHV5-51A0A0C4DH38 117 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 H3BVH4 76 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 HRKO00198 91 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 FOXO1Q12778 655 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 ZNF385CQ66K41 422 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 MRPL54Q6P161 138 aaKnown RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 RSG1Q9BU20 258 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 OOEPA6NGQ2 149 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 PAGE4O60829 102 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 RUNX1Q01196 453 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 ALKBH6Q3KRA9 238 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 PABPC1L2AQ5JQF8 200 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 MRGPRGQ86SM5 289 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 GAPTQ8N292 157 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 VSTM2LQ96N03 204 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 OR4C12Q96R67 309 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 WFDC6Q9BQY6 131 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 SMDT1Q9H4I9 107 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 DOK5Q9P104 306 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 MTCH2Q9Y6C9 303 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 EML2O95834 649 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 ACTL6AO96019 429 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 LIMS1P48059 325 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM255AQ5JRV8 349 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 ATG4DQ86TL0 474 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 MRPL30Q8TCC3 161 aaKnown RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 GMPPAQ96IJ6 420 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 GPR61Q9BZJ8 451 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 MS4A5Q9H3V2 200 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 CCL28Q9NRJ3 127 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 RCC2Q9P258 522 aaKnown RBP7.77□□□□□ -1.17
PTPRM-202ENST00000400053 KLK13Q9UKR3 277 aa7.77□□□□□ -1.17
PTPRM-202ENST00000400053 LCTP09848 1927 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 LOC285556D6RIA3 1793 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 LMX1BO60663 402 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 EIF3GO75821 320 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 PPYP01298 95 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 MT-ND6P03923 174 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 CLDN18P56856 261 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 CALHM1Q8IU99 346 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 TGIF2LYQ8IUE0 185 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 CADM4Q8NFZ8 388 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM265A0A087WTH1 108 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 RHBDL1O75783 438 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 CDS2O95674 445 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 H2BFSP57053 126 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 NAAAQ02083 359 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 CIRBPQ14011 172 aaKnown RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 SLC35E3Q7Z769 313 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 C1orf174Q8IYL3 243 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 SYT8Q8NBV8 401 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 KLHDC2Q9Y2U9 406 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 MRPS18BQ9Y676 258 aaKnown RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 RALGAPA2Q2PPJ7 1873 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 RECKO95980 971 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 SSPNQ14714 243 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 ISXQ2M1V0 245 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 SPANXN1Q5VSR9 72 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 WDFY1Q8IWB7 410 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 STPG3Q8N7X2 389 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 OR1L8Q8NGR8 309 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 SDHCQ99643 169 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 HDHD3Q9BSH5 251 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 DSPPQ9NZW4 1301 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 TRDCB7Z8K6 153 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 ZNF324O75467 553 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 MGPP08493 103 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 PEBP1P30086 187 aaKnown RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 IER3P46695 156 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 PSG5Q15238 335 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 NHLRC3Q5JS37 347 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 TMEM183AQ8IXX5 376 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 ADAT3Q96EY9 351 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-202ENST00000400053 DIRC2Q96SL1 478 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 KCNK7Q9Y2U2 307 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 DOPEY2Q9Y3R5 2298 aa7.76□□□□□ -1.17
PTPRM-202ENST00000400053 TRAV39A0A0B4J263 110 aa7.75□□□□□ -1.17
PTPRM-202ENST00000400053 IGKV1-8A0A0C4DH67 115 aa7.75□□□□□ -1.17
PTPRM-202ENST00000400053 MT-CO3P00414 261 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms