RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CST9LP1Q5W188 147 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 OR1L1Q8NH94 360 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 HEXA-AS1Q9H8Q6 139 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 IGHV2OR16-5A0A0B4J2B6 119 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 CRYM-AS1A6NIL9 109 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 OR13C7P0DN81 318 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 KITLGP21583 273 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 FAM57AQ8TBR7 257 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 HPSE2Q8WWQ2 592 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 CCL13Q99616 98 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 SHARPINQ9H0F6 387 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 PIEZO2Q9H5I5 2752 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 IGKV1-27A0A075B6S5 117 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
SCAF4-202ENST00000399804 H0YL77 283 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 GPR37O15354 613 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 IL36GQ9NZH8 169 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 NPTNQ9Y639 398 aa11.97□□□□□ -0.49
SCAF4-202ENST00000399804 CDRT15L2A8MXV6 281 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 OR4A8P0C604 315 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 GLRXP35754 106 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 HAGHQ16775 308 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 NTNG2Q96CW9 530 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 RPS10-NUDT3A0A1W2PQS6 291 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 MGST3O14880 152 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 ZNF735P0CB33 412 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 MRPS11P82912 194 aaKnown RBP11.96□□□□□ -0.49
SCAF4-202ENST00000399804 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
SCAF4-202ENST00000399804 PPIHO43447 177 aaKnown RBP11.96□□□□□ -0.5
SCAF4-202ENST00000399804 SYNGR2O43760 224 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF14P17017 642 aaPredicted RBP11.96□□□□□ -0.5
SCAF4-202ENST00000399804 RAB7AP51149 207 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 IGKV1D-8A0A087WSZ0 117 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 A0A1W2PPE3 182 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 B3GALNT1O75752 331 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.5
SCAF4-202ENST00000399804 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
SCAF4-202ENST00000399804 GLIPR1P48060 266 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 TAS2R30P59541 319 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 GAL3ST2Q9H3Q3 398 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 ADH4P08319 380 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 RBMS3Q6XE24 437 aaKnown RBP11.95□□□□□ -0.5
SCAF4-202ENST00000399804 RHOFQ9HBH0 211 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 XIRP2A4UGR9 3374 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 WNK2Q9Y3S1 2297 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 UNC80Q8N2C7 3258 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 CLDN14O95500 239 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 GYPAP02724 150 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
SCAF4-202ENST00000399804 TMEM131Q92545 1883 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 NCOR2Q9Y618 2525 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF345Q14585 488 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 ARSJQ5FYB0 599 aaPredicted RBP11.94□□□□□ -0.5
SCAF4-202ENST00000399804 LHX4Q969G2 390 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 RAXQ9Y2V3 346 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 UBE2L5PA0A1B0GUS4 154 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 P2RY1P47900 373 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 RAB5CP51148 216 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 UBE2KP61086 200 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 RTBDNQ9BSG5 229 aaPredicted RBP11.94□□□□□ -0.5
SCAF4-202ENST00000399804 C20orf24Q9BUV8 137 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
SCAF4-202ENST00000399804 CNIH1O95406 144 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 QRFPP83859 136 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
SCAF4-202ENST00000399804 ODAMA1E959 279 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 NUDT19A8MXV4 375 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 HRASP01112 189 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 IGHG3P01860 377 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 G6PCP35575 357 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 RSPO1Q2MKA7 263 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 MIDNQ504T8 468 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF818PQ6ZRF7 136 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 STPG2Q8N412 459 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PINX1Q96BK5 328 aaKnown RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 OPN1MWP04001 364 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 S100PP25815 95 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms