RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MGLLQ99685 303 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 CCDC90BQ9GZT6 254 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 RAB26Q9ULW5 256 aa11.82□□□□□ -0.52
SMIM11A-203ENST00000399299 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 SLC17A2O00624 439 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 CD1BP29016 333 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 NKAPLQ5M9Q1 402 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 OR2W3Q7Z3T1 314 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 MOB3BQ86TA1 216 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 PRR18Q8N4B5 295 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 OR4X2Q8NGF9 303 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 CNBD2Q96M20 576 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 SULT4A1Q9BR01 284 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 KCNIP1Q9NZI2 227 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 LRRC42Q9Y546 428 aa11.81□□□□□ -0.52
SMIM11A-203ENST00000399299 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 SLC31A2O15432 143 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 RANBP1P43487 201 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 REG1BP48304 166 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 ZNF134P52741 427 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 HTD2P86397 168 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 CT45A1Q5HYN5 189 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 TCTEX1D4Q5JR98 221 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 LY6G6FQ5SQ64 297 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 ZNF367Q7RTV3 350 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 Q8N6K4 173 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 OR10V1Q8NGI7 309 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 OR2T10Q8NGZ9 312 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 CT45A3Q8NHU0 189 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 R3HDM4Q96D70 268 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 GFI1Q99684 422 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 ACOT13Q9NPJ3 140 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 OR2S2Q9NQN1 319 aa11.8□□□□□ -0.52
SMIM11A-203ENST00000399299 LANCL1O43813 399 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 NAPSAO96009 420 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 ARSBP15848 533 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 MAP2K4P45985 399 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 FABP5Q01469 135 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 HNF4GQ14541 408 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 HMGN3Q15651 99 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 MORN2Q502X0 79 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 C6orf201Q7Z4U5 140 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 FAM89BQ8N5H3 189 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 URM1Q9BTM9 101 aaKnown RBP11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 FAAP24Q9BTP7 215 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 LPAR5Q9H1C0 372 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 KCNK15Q9H427 330 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 PLGRKTQ9HBL7 147 aa11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 TSSC4Q9Y5U2 329 aaPredicted RBP11.79□□□□□ -0.52
SMIM11A-203ENST00000399299 A0A0A6YYD4 124 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 IGHV3-72A0A0B4J1Y9 119 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 YPEL1O60688 119 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 MRPS14O60783 128 aaKnown RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 RGS11O94810 467 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 ATP6V1G2O95670 118 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 IGHG2P01859 326 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 BLVRBP30043 206 aaPredicted RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 PSMD7P51665 324 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 GABARAPL2P60520 117 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 KPRPQ5T749 579 aaPredicted RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 ZNF880Q6PDB4 577 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 SVOPQ8N4V2 548 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 OR8H1Q8NGG4 311 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 CHPT1Q8WUD6 406 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 GALMQ96C23 342 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 YPEL2Q96QA6 119 aa11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 AK6Q9Y3D8 172 aaKnown RBP11.78□□□□□ -0.52
SMIM11A-203ENST00000399299 TRBV6-6A0A0A6YYG2 114 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 TCRBV4S1A1TA0A5B7 111 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 PSMB11A5LHX3 300 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 G3V4G9 280 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 MOSP00540 346 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 GNMTQ14749 295 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 P2RY14Q15391 338 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 RAB11BQ15907 218 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 SSX1Q16384 188 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 BEAN1Q3B7T3 259 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 C1QL4Q86Z23 238 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 OR52L2PQ8NGH6 319 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 ABHD14AQ9BUJ0 271 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 PLEKHJ1Q9NW61 149 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 NDUFB11Q9NX14 153 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 ABRACLQ9P1F3 81 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
SMIM11A-203ENST00000399299 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 NCBP2LA6PVI3 153 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms