RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MUCL1Q96DR8 90 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TIMP4Q99727 224 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 BARX1Q9HBU1 254 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 KLF2Q9Y5W3 355 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 RALGAPA1Q6GYQ0 2036 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 LOC390937A0A1W2PQ73 354 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 GPM6AP51674 278 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 EDDM3AQ14507 147 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 ELOBQ15370 118 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 HIST1H2BLQ99880 126 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 ABHD14AQ9BUJ0 271 aa12.68□□□□□ -0.38
RPRD1A-202ENST00000399022 LOC101059948A0A1B0GTJ6 334 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 ZNF732B4DXR9 585 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 C9JQL5 133 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 CXCL1P09341 107 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 SPINK9Q5DT21 86 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 G6PC2Q9NQR9 355 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 GPR27Q9NS67 375 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 SNURFLB1AK76 121 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 ROS1P08922 2347 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 MS4A18H0YCH9 400 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 MS4A18Q3C1V0 323 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 STUMQ69YW2 141 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 TMEM178AQ8NBL3 297 aa12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 DUSP15Q9H1R2 295 aaPredicted RBP12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 RIMS4Q9H426 269 aaPredicted RBP12.67□□□□□ -0.38
RPRD1A-202ENST00000399022 DMWDQ09019 674 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 MESP1Q9BRJ9 268 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 ACTL6BO94805 426 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 RAB35Q15286 201 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 DNAJC4Q9NNZ3 241 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 MANBALQ9NQG1 85 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 GRIFINA4D1Z8 144 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 ZNF506Q5JVG8 444 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 LEMD1Q68G75 181 aa12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 AKIRIN1Q9H9L7 192 aaPredicted RBP12.66□□□□□ -0.38
RPRD1A-202ENST00000399022 LYPD3O95274 346 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 MPLP40238 635 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 CCL20P78556 96 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 ZDHHC23Q8IYP9 409 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 PPP1R35Q8TAP8 253 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 MRGPRFQ96AM1 343 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 USF1P22415 310 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 RAB7AP51149 207 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 OR1C1Q15619 314 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 HPRT1P00492 218 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 FGF5P12034 268 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 TBC1D28Q2M2D7 210 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 CORO2AQ92828 525 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 RBKSQ9H477 322 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 A0A087WWC5 75 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 CDX2Q99626 313 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
RPRD1A-202ENST00000399022 A0A1W2PQM1 296 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 CHRNB4P30926 498 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 RAC3P60763 192 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 PAFAH1B2P68402 229 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 KLF13Q9Y2Y9 288 aaPredicted RBP12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 C3AR1Q16581 482 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 BOD1Q96IK1 185 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 MPDZO75970 2070 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 IFI6P09912 130 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 IRF2P14316 349 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 SRD5A2P31213 254 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 TMEM187Q14656 261 aa12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 RSPO4Q2I0M5 234 aaPredicted RBP12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
RPRD1A-202ENST00000399022 A0A0J9YW62 118 aa12.63□□□□□ -0.39
RPRD1A-202ENST00000399022 LNP1A1A4G5 178 aa12.63□□□□□ -0.39
RPRD1A-202ENST00000399022 PMS2P1A4D2B8 440 aa12.63□□□□□ -0.39
RPRD1A-202ENST00000399022 LRRC3CA6NJW4 275 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms