RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HLA-DRB3P79483 266 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 DMKNQ6E0U4 476 aaPredicted RBP12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 ZPLD1Q8TCW7 415 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 PIPOXQ9P0Z9 390 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 P01737 135 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM106CPP0CH98 169 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 PRDX2P32119 198 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 PDLIM4P50479 330 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 UCP2P55851 309 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 DHRS11Q6UWP2 260 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 LRP11Q86VZ4 500 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 SPSB2Q99619 263 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 SOSTQ9BQB4 213 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 TOLLIPQ9H0E2 274 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM167BQ9NRX6 74 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 CLDN34H7C241 214 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 M0R2Z0 102 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 COL8A1P27658 744 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 SULT1A1P50225 295 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 IL24Q13007 206 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 INPP5JQ15735 1006 aaPredicted RBP12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 STARD4Q96DR4 205 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 TMEM204Q9BSN7 226 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
PCDHA11-201ENST00000398640 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 SYNGR1O43759 233 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 ZNF426Q9BUY5 554 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM181BA6NEQ2 426 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 ROM1Q03395 351 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 C11orf91Q3C1V1 193 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 RGP1Q92546 391 aaPredicted RBP12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 LPAR5Q9H1C0 372 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 PATJQ8NI35 1801 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 CCKARP32238 428 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 MFNGO00587 321 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 RANP62826 216 aaKnown RBP12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 CENPVQ7Z7K6 275 aaPredicted RBP12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 LSMEM1Q8N8F7 131 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 RPS4Y2Q8TD47 263 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 SIRT7Q9NRC8 400 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 LPAR3Q9UBY5 353 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 PRNDQ9UKY0 176 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 TEX30Q5JUR7 227 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 OR5A2Q8NGI9 324 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 NEUROG3Q9Y4Z2 214 aa12.35□□□□□ -0.43
PCDHA11-201ENST00000398640 NKX2-6A6NCS4 301 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 CGB1A6NKQ9 187 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 ADAT3Q96EY9 351 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 CACNA1CQ13936 2221 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 IGKV1D-16P01601 117 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 NGFRP08138 427 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 AREGP15514 252 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 ANKRD55Q3KP44 614 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 LYZL2Q7Z4W2 148 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 SHISA5Q8N114 240 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 OGG1O15527 345 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 ZNF137PP52743 207 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 CD300CQ08708 224 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 ZNF273Q14593 569 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 MS4A10Q96PG2 267 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 OR2W1Q9Y3N9 320 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 TRAV8-7A0A075B6U6 113 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 TCTAP57738 103 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 TBR1Q16650 682 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 PRNTQ86SH4 94 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 RFLNBQ8N5W9 214 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 CLRN3Q8NCR9 226 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 YAE1D1Q9NRH1 226 aa12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 AURKAIP1Q9NWT8 199 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-201ENST00000398640 LCTP09848 1927 aa12.33□□□□□ -0.43
PCDHA11-201ENST00000398640 CTSBP07858 339 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ZP3P21754 424 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 P2RY1P47900 373 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 ZNF841Q6ZN19 808 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 J3QR06 171 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 CFHR1Q03591 330 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 EBLN2Q6P2I7 272 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 OR1L6Q8NGR2 347 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 MANBALQ9NQG1 85 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
PCDHA11-201ENST00000398640 TSPAN2O60636 221 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms