RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 OOSP2Q86WS3 158 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 TMPRSS12Q86WS5 348 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 BOLLQ8N9W6 283 aaKnown RBP5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 C5orf17Q8NAS9 161 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 ZNF417Q8TAU3 575 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 LRRC3BQ96PB8 259 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 CIB3Q96Q77 187 aaPredicted RBP5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 APOOQ9BUR5 198 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 SLC25A31Q9H0C2 315 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 MAP1LC3AQ9H492 121 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 JKAMPQ9P055 326 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 KLK11Q9UBX7 282 aa5.68□□□□□ -1.5
TM9SF4-202ENST00000398022 TRAV38-1A0A0B4J264 116 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 LDB3O75112 727 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 TCN2P20062 427 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CDK2P24941 298 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 HIST1H1AQ02539 215 aaPredicted RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 PLP2Q04941 152 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CD69Q07108 199 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 EXOSC7Q15024 291 aaKnown RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 GLT8D1Q68CQ7 371 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 STUMQ69YW2 141 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 MOB3CQ70IA8 216 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 OR10G6Q8NH81 332 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 THEM6Q8WUY1 208 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 ZNF586Q9NXT0 402 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 RALYQ9UKM9 306 aaKnown RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 FLVCR1Q9Y5Y0 555 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A1B0GVT2 93 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 FRG2CA6NGY1 282 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 PLPP3O14495 311 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2A4O95047 310 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 HIST1H2ABP04908 130 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CD33P20138 364 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CD1CP29017 333 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 GLRXP35754 106 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 TAS2R20P59543 309 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 PSG4Q00888 419 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 HSD52Q0P140 79 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 C3AR1Q16581 482 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 TBC1D28Q2M2D7 210 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CD300EQ496F6 205 aaPredicted RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 HIST3H2AQ7L7L0 130 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 ZNF440Q8IYI8 595 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 DOK4Q8TEW6 326 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 HIST1H2ACQ93077 130 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 OXGR1Q96P68 337 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 SIGLEC12Q96PQ1 595 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2A7Q96R45 310 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 NMNAT3Q96T66 252 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 TMEM14AQ9Y6G1 99 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A1W2PRS3 328 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 NPIPB5A8MRT5 1133 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 SYNGR4O95473 234 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 NGFRP08138 427 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 AKAIN1P0CW23 69 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 PGAM2P15259 253 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 RPS11P62280 158 aaKnown RBP eCLIP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 UBA52P62987 128 aaKnown RBP5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 LTBQ06643 244 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 LEG1Q6P5S2 330 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 STAC2Q6ZMT1 411 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 ABHD5Q8WTS1 349 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 SLC25A38Q96DW6 304 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 BET1LQ9NYM9 111 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 CACNA1CQ13936 2221 aa5.67□□□□□ -1.5
TM9SF4-202ENST00000398022 KIR2DS5A0A0G2JLQ3 304 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 A0A0G2JNG1 304 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 F2RL2O00254 374 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 FGF17O60258 216 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 HPNP05981 417 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 CT62P0C5K7 136 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 PSG2P11465 335 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 NPY1RP25929 384 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR10J1P30954 320 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 PTH2RP49190 550 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 NXPH1P58417 271 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2F1Q13607 317 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 EDDM3AQ14507 147 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 KIR2DS5Q14953 304 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 AWAT1Q58HT5 328 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 FAM78AQ5JUQ0 283 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 ACTL10Q5JWF8 245 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 FHL5Q5TD97 284 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 BTNL8Q6UX41 500 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 HIST2H3AQ71DI3 136 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 RFLNBQ8N5W9 214 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR52R1Q8NGF1 315 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 BLNKQ8WV28 456 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 PNPLA2Q96AD5 504 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR2A5Q96R48 311 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 DERL1Q9BUN8 251 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 FLRT3Q9NZU0 649 aa5.66□□□□□ -1.5
TM9SF4-202ENST00000398022 OR5V1Q9UGF6 321 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms