RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ZNF596Q8TC21 504 aa20.56■□□□□ 0.88
TMEM55B-202ENST00000398020 GALMQ96C23 342 aa20.56■□□□□ 0.88
TMEM55B-202ENST00000398020 HILPDAQ9Y5L2 63 aa20.56■□□□□ 0.88
TMEM55B-202ENST00000398020 J3QR06 171 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 GSTP1P09211 210 aaKnown RBP20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 PTHLHP12272 177 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 HTR1DP28221 377 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 PRRX1P54821 245 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 HLA-DRB3P79483 266 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 HLA-DRB5Q30154 266 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 CNPY1Q3B7I2 92 aa20.55■□□□□ 0.88
TMEM55B-202ENST00000398020 A0A0A6YYH2 397 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 A0A0A6YYJ9 748 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 A6NJ64 397 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 IGHV4-59P01825 116 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 SCTP09683 121 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 BEND2Q8NDZ0 799 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 MMP28Q9H239 520 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 XRCC3O43542 346 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 ELK1P19419 428 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 PPP1CCP36873 323 aaKnown RBP20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 GNG2P59768 71 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 MADCAM1Q13477 382 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 SLC9A3R2Q15599 337 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 MZT2AQ6P582 158 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 JMJD8Q96S16 334 aa20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 RSL24D1Q9UHA3 163 aaKnown RBP20.54■□□□□ 0.88
TMEM55B-202ENST00000398020 BUB1B-PAK6H3BSN5 160 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 SLC31A2O15432 143 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 SSX5O60225 188 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 TMEM69Q5SWH9 247 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 LDLRAD3Q86YD5 345 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 MALSU1Q96EH3 234 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 AUNIPQ9H7T9 357 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 MGAT4AQ9UM21 535 aa20.53■□□□□ 0.88
TMEM55B-202ENST00000398020 TRDCB7Z8K6 153 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 APOA1P02647 267 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 IER3P46695 156 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 HTD2P86397 168 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 MINOS1Q5TGZ0 78 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 ST6GALNAC5Q9BVH7 336 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 CCDC59Q9P031 241 aaKnown RBP20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 DPM3Q9P2X0 92 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 JPT1Q9UK76 154 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 MINOS1-NBL1R4GNA1 71 aa20.52■□□□□ 0.88
TMEM55B-202ENST00000398020 ZNF134P52741 427 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 PNLIPRP3Q17RR3 467 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 TMEM30BQ3MIR4 351 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 MORN2Q502X0 79 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 OR10X1Q8NGY0 326 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 SSMEM1Q8WWF3 244 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 MEGF9Q9H1U4 602 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 OR1A1Q9P1Q5 309 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 SLC23A1Q9UHI7 598 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 IGKV1D-8A0A087WSZ0 117 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 POM121CA8CG34 1229 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 FAM25AB3EWG3 89 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 FAM25CB3EWG5 89 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 FAM25GB3EWG6 89 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 MNDAP41218 407 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 TAS2R20P59543 309 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 UBA52P62987 128 aaKnown RBP20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 GCDHQ92947 438 aaPredicted RBP20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 CMTM3Q96MX0 182 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 SSX3Q99909 188 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 DCUN1D5Q9BTE7 237 aa20.51■□□□□ 0.87
TMEM55B-202ENST00000398020 IGKV1-6A0A0C4DH72 117 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 LEUTXA8MZ59 168 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 RGS5O15539 181 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 GSTT2P0CG29 244 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 GSTT2BP0CG30 244 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 DTYMKP23919 212 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 RAB13P51153 203 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 PITPNAQ00169 270 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 CT45A1Q5HYN5 189 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 ZNF439Q8NDP4 499 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 CT45A3Q8NHU0 189 aa20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 MRPS7Q9Y2R9 242 aaKnown RBP20.5■□□□□ 0.87
TMEM55B-202ENST00000398020 H3BUX3 64 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 CTDSP2O14595 271 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 FABP7O15540 132 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 DIAPH2-AS1Q14236 149 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 HERPUD1Q15011 391 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 IGSF11Q5DX21 431 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 CHIAQ9BZP6 476 aa20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 PARP12Q9H0J9 701 aaKnown RBP20.49■□□□□ 0.87
TMEM55B-202ENST00000398020 LY6LH3BQJ8 138 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 FCER2P06734 321 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 KIR2DS4P43632 304 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 KIR2DS1Q14954 304 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 TPTE2P1Q5T6R2 138 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 STEAP3Q658P3 488 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 SLC25A48Q6ZT89 311 aaKnown RBP20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 SLIRPQ9GZT3 109 aaKnown RBP20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 MIXL1Q9H2W2 232 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 AMMECR1Q9Y4X0 333 aaPredicted RBP20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 MEIS3P1A6NDR6 274 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 ZNF701M0R085 212 aaPredicted RBP20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 BET1O15155 118 aa20.48■□□□□ 0.87
TMEM55B-202ENST00000398020 HSPA12AO43301 675 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms