RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RPL23AP62750 156 aaKnown RBP4.96□□□□□ -1.61
PTPRD-206ENST00000397617 PJVKQ0ZLH3 352 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 DAZAP2Q15038 168 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-206ENST00000397617 BHLHA15Q7RTS1 189 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-206ENST00000397617 OR2C3Q8N628 320 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 TCTEX1D2Q8WW35 142 aa4.96□□□□□ -1.61
PTPRD-206ENST00000397617 ADAT1Q9BUB4 502 aaKnown RBP4.96□□□□□ -1.61
PTPRD-206ENST00000397617 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 FAM230AA0A1W2PPH8 454 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM250H0YL14 139 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 S100A8P05109 93 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 SERPINF1P36955 418 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 RPP30P78346 268 aaKnown RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 MRPL30Q8TCC3 161 aaKnown RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 RELTQ969Z4 430 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 BANF2Q9H503 90 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 FSCN3Q9NQT6 498 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 FKBP11Q9NYL4 201 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 M0QYG6 137 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 GUCA2AQ02747 115 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ST6GALNAC3Q8NDV1 305 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 OR1J1Q8NGS3 322 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 OR5B3Q8NH48 314 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF596Q8TC21 504 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 GINS3Q9BRX5 216 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 SLC5A7Q9GZV3 580 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 FXYD6Q9H0Q3 95 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 TRAV24A0A0B4J272 114 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ODAMA1E959 279 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 C5orf51A6NDU8 294 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 MPTX1A8MV57 137 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 AGRPO00253 132 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 SIGLEC5O15389 551 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 PGAM2P15259 253 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 GNB3P16520 340 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 PNRC1Q12796 327 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF788Q6ZQV5 615 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 C14orf79Q96F83 325 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 TAAR6Q96RI8 345 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 SMOC1Q9H4F8 434 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 A0A087X0M5 115 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1B0GX30 115 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 hADV38S2A0JD32 116 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF561Q8N587 486 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 OSR1Q8TAX0 266 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 NEIL1Q96FI4 390 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 TSNAXQ99598 290 aaKnown RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 AGMATQ9BSE5 352 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 KPTNQ9Y664 436 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 HRASP01112 189 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 NPY4RP50391 375 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ACP7Q6ZNF0 438 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 GAL3ST2Q9H3Q3 398 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 ESRP2Q9H6T0 727 aaKnown RBP4.96□□□□□ -1.62
PTPRD-206ENST00000397617 COQ3Q9NZJ6 369 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 LINC00312Q9Y6C7 94 aa4.96□□□□□ -1.62
PTPRD-206ENST00000397617 TRAV38-1A0A0B4J264 116 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 A6NIN4 97 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 CLDN14O95500 239 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 IRF2P14316 349 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 IL2RGP31785 369 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 LBHQ53QV2 105 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 WDFY1Q8IWB7 410 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C9orf106Q8NAJ2 232 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MARC2Q969Z3 335 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF471Q9BX82 626 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 METTL8Q9H825 291 aaKnown RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 ACTL6BO94805 426 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 CELA3AP09093 270 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 H2AFB1P0C5Y9 115 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 OR8U9P0C7N5 309 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 NQO2P16083 231 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MTURNQ8N3F0 131 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 OR8U1Q8NH10 309 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MMP26Q9NRE1 261 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 hCG_1809904A0A1W2PP81 198 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PPE2 198 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PR64 198 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PRV1 198 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 PPIHO43447 177 aaKnown RBP4.95□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF585AQ6P3V2 769 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 SLC25A40Q8TBP6 338 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C18orf12Q96KH6 178 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 PFDN5Q99471 154 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 P2RX4Q99571 388 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C11orf1Q9H5F2 150 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 REV3LO60673 3130 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MGAQ8IWI9 3026 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C22orf46C9J442 243 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 KLK10O43240 276 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 MPV17P39210 176 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 C10orf91Q5T1B1 145 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 GGNBP1Q5YKI7 109 aa4.95□□□□□ -1.62
PTPRD-206ENST00000397617 S1PR3Q99500 378 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms