RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PIPOXQ9P0Z9 390 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
MCF2L-205ENST00000397017 C1QTNF9BB2RNN3 333 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 E5RGE8 158 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 BCL2L11O43521 198 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 C1QTNF9P0C862 333 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 OR2B8PP59922 312 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 MRPL37Q9BZE1 423 aaKnown RBP12.89□□□□□ -0.35
MCF2L-205ENST00000397017 ATPIF1Q9UII2 106 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 ZNF107Q9UII5 783 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-205ENST00000397017 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 APELAP0DMC3 54 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-205ENST00000397017 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 Q9UFV3 132 aa12.89□□□□□ -0.35
MCF2L-205ENST00000397017 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 CHST1O43916 411 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
MCF2L-205ENST00000397017 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 NHLH2Q02577 135 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 BAXQ07812 192 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 FAM89BQ8N5H3 189 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 OR52M1Q8NGK5 317 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 SFT2D1Q8WV19 159 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
MCF2L-205ENST00000397017 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 ZNF14P17017 642 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-205ENST00000397017 GLRXP35754 106 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 IL24Q13007 206 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 EDARADDQ8WWZ3 215 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
MCF2L-205ENST00000397017 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 ALX3O95076 343 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 ESCO2Q56NI9 601 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 Q6ZRG5 221 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-205ENST00000397017 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 LAMP3Q9UQV4 416 aa12.88□□□□□ -0.35
MCF2L-205ENST00000397017 LCN15Q6UWW0 184 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 MRGPRGQ86SM5 289 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 WDR31Q8NA23 367 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 PKIBQ9C010 78 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 A8MXE2 369 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 TXNL1O43396 289 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 GNB1P62873 340 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 FAHD2BQ6P2I3 314 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-205ENST00000397017 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 FAHD2AQ96GK7 314 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 TMED3Q9Y3Q3 217 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 TMEM210A6NLX4 147 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 LRRC10Q5BKY1 277 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 FAM53AQ6NSI3 398 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-205ENST00000397017 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 C20orf24Q9BUV8 137 aa12.87□□□□□ -0.35
MCF2L-205ENST00000397017 USP9YO00507 2555 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-205ENST00000397017 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 SHOXO15266 292 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 PSPNO60542 156 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 ZNF250P15622 560 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 RPL31P62899 125 aaKnown RBP12.86□□□□□ -0.35
MCF2L-205ENST00000397017 KLRB1Q12918 225 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-205ENST00000397017 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-205ENST00000397017 FAM215AQ9Y5M1 114 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 TNFSF13O75888 250 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 MOB1BQ7L9L4 216 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
MCF2L-205ENST00000397017 MOB3AQ96BX8 217 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 RAB9BQ9NP90 201 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 LRRK2Q5S007 2527 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 TMEM230Q96A57 120 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 MEGF10Q96KG7 1140 aa12.86□□□□□ -0.35
MCF2L-205ENST00000397017 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-205ENST00000397017 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
MCF2L-205ENST00000397017 F2RL1P55085 397 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 TESK1Q15569 626 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 C12orf77C9JDV5 145 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 MLNRO43193 412 aa12.85□□□□□ -0.35
MCF2L-205ENST00000397017 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms