RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 M1APQ8TC57 530 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 CYB5R3P00387 301 aaPredicted RBP11.81□□□□□ -0.52
NUP98-204ENST00000397004 SRD5A2P31213 254 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 GFRA1P56159 465 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 DEFA6Q01524 100 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 RTP5Q14D33 572 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
NUP98-204ENST00000397004 OPA3Q9H6K4 179 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 DOCK11Q5JSL3 2073 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 PTBP3O95758 552 aaKnown RBP11.81□□□□□ -0.52
NUP98-204ENST00000397004 COL8A2P25067 703 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 ARF1P84077 181 aaKnown RBP11.81□□□□□ -0.52
NUP98-204ENST00000397004 CLN3Q13286 438 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 OR13D1Q8NGV5 346 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 PACRGQ96M98 296 aaPredicted RBP11.81□□□□□ -0.52
NUP98-204ENST00000397004 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
NUP98-204ENST00000397004 NKX6-1P78426 367 aaPredicted RBP11.8□□□□□ -0.52
NUP98-204ENST00000397004 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
NUP98-204ENST00000397004 GZMBP10144 247 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 NDUFB7P17568 137 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 OR5P3Q8WZ94 311 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM86C1Q9NVL1 165 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 PLA2G3Q9NZ20 509 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 LAMA5O15230 3695 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 TRBV24-1A0A075B6N3 115 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A10PA6NDY2 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A18PA6NE21 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A16PA6NEW6 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A20PA6NIJ5 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A8PA6NJQ4 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A7PA6NKC0 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A22PA8MWA6 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A12PA8MX19 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A5PA8MXJ8 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A23PA8MXZ1 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 CYTIPO60759 359 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 TRAPPC6AO75865 159 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A15PP0C7V4 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A13PP0C7W8 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A14PP0C7W9 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 FAM90A24PP0C7X0 464 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 COL10A1Q03692 680 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 P2RY6Q15077 328 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 DPPA3Q6W0C5 159 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 DNAJC13O75165 2243 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 AMBPP02760 352 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 OR2Y1Q8NGV0 311 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 IL1F10Q8WWZ1 152 aa11.8□□□□□ -0.52
NUP98-204ENST00000397004 CLDN34H7C241 214 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 DNPH1O43598 174 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 APLNRP35414 380 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 ELLP55199 621 aaPredicted RBP11.79□□□□□ -0.52
NUP98-204ENST00000397004 OR8G1Q15617 311 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 NEK7Q8TDX7 302 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 C5orf30Q96GV9 206 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 PPP1R3CQ9UQK1 317 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 C9J4A7 227 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 DDTP30046 118 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 IFI44Q8TCB0 444 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 BOD1L1Q8NFC6 3051 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.79□□□□□ -0.52
NUP98-204ENST00000397004 SYNGR2O43760 224 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 UFSP2Q9NUQ7 469 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
NUP98-204ENST00000397004 CEBPZOSA8MTT3 80 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 HBE1P02100 147 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
NUP98-204ENST00000397004 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
NUP98-204ENST00000397004 WDR86Q86TI4 376 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 C1orf87Q8N0U7 546 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 PRR18Q8N4B5 295 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 CABLES2Q9BTV7 478 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 OR51B6Q9H340 312 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 ELOA3CA0A087WX78 387 aaPredicted RBP11.78□□□□□ -0.52
NUP98-204ENST00000397004 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 B4DEV8 164 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 WNT5AP41221 380 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 SPINK14Q6IE38 97 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 STX12Q86Y82 276 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 TUSC5Q8IXB3 177 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 S100PBPQ96BU1 408 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 HES7Q9BYE0 225 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
NUP98-204ENST00000397004 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
NUP98-204ENST00000397004 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms