RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 IGHV3-64DA0A0J9YX35 117 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 IFNL4K9M1U5 179 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 WNT9BO14905 357 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 CHST1O43916 411 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 TSPAN15O95858 294 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 SNCAP37840 140 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 CAMLGP49069 296 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 CEBPDP49716 269 aaPredicted RBP14.13□□□□□ -0.15
NUP50-202ENST00000396096 MZT1Q08AG7 82 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 HSD17B11Q8NBQ5 300 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 ZBTB34Q8NCN2 500 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 C19orf12Q9NSK7 152 aa14.13□□□□□ -0.15
NUP50-202ENST00000396096 OOEPA6NGQ2 149 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 K7N7A8 449 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 WRBO00258 174 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 SFTA3P0C7M3 94 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 CEACAM6P40199 344 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 MIDNQ504T8 468 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 DHRS7BQ6IAN0 325 aaPredicted RBP14.12□□□□□ -0.15
NUP50-202ENST00000396096 PRR18Q8N4B5 295 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 CLRN3Q8NCR9 226 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 PRSS33Q8NF86 280 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 TMEM171Q8WVE6 324 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 SCRT1Q9BWW7 348 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 PPP1R3CQ9UQK1 317 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 RNF212BA8MTL3 300 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 H2AFB1P0C5Y9 115 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 CD80P33681 288 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 FABP6P51161 128 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 PAX5Q02548 391 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 MSMO1Q15800 293 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 C3orf36Q3SXR2 165 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 ZNF585BQ52M93 769 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 PRAMEF6Q5VXH4 476 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 DRAM1Q8N682 238 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 RAB40CQ96S21 281 aa14.12□□□□□ -0.15
NUP50-202ENST00000396096 PARP12Q9H0J9 701 aaKnown RBP14.12□□□□□ -0.15
NUP50-202ENST00000396096 A6NLC8 198 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 UMAD1C9J7I0 102 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 C12orf77C9JDV5 145 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 AGPAT2O15120 278 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 ASCL1P50553 236 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 DYNLT3P51808 116 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 CLINT1Q14677 625 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 SMIM21Q3B7S5 101 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 ZNF295-AS1Q8N0V1 137 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 OR5C1Q8NGR4 320 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 GALMQ96C23 342 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 COQ2Q96H96 371 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 KCNS2Q9ULS6 477 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 RBM7Q9Y580 266 aaKnown RBP14.11□□□□□ -0.15
NUP50-202ENST00000396096 GTF3C1Q12789 2109 aa14.11□□□□□ -0.15
NUP50-202ENST00000396096 C9JQL5 133 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 PTBP3O95758 552 aaKnown RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 OR3A1P47881 315 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 ZNF616Q08AN1 781 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 Q6ZRM9 215 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 ZNF645Q8N7E2 425 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 OR1L1Q8NH94 360 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 SEBOXQ9HB31 216 aaPredicted RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 MSL2Q9HCI7 577 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 FAM215AQ9Y5M1 114 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 WSB1Q9Y6I7 421 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 A0A1B0GW64 132 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 TXNL1O43396 289 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 PRH1P02810 166 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 EPHA1P21709 976 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 OMGP23515 440 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 EIF4EBP1Q13541 118 aaPredicted RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 PEA15Q15121 130 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 TIMM23BQ5SRD1 257 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 TMEM182Q6ZP80 229 aaPredicted RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 LFNGQ8NES3 379 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 UBALD1Q8TB05 177 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 GNPNAT1Q96EK6 184 aaPredicted RBP14.1□□□□□ -0.15
NUP50-202ENST00000396096 ATP5SQ99766 215 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 CACNG5Q9UF02 275 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 FZR1Q9UM11 496 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 WASF3Q9UPY6 502 aa14.1□□□□□ -0.15
NUP50-202ENST00000396096 TOR1AO14656 332 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 C1QL1O75973 258 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 NBL1P41271 181 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 NPBWR1P48145 328 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 FHITP49789 147 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 AESQ08117 197 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 C1orf185Q5T7R7 199 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 OR10Z1Q8NGY1 313 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 OR2G3Q8NGZ4 309 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 RNASE11Q8TAA1 199 aaKnown RBP14.09□□□□□ -0.15
NUP50-202ENST00000396096 SNIP1Q8TAD8 396 aaKnown RBP14.09□□□□□ -0.15
NUP50-202ENST00000396096 LURAP1Q96LR2 239 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
NUP50-202ENST00000396096 CNOT1A5YKK6 2376 aaKnown RBP14.08□□□□□ -0.15
NUP50-202ENST00000396096 CELSR3Q9NYQ7 3312 aa14.08□□□□□ -0.15
NUP50-202ENST00000396096 CST7O76096 145 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 HBZP02008 142 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 CRYABP02511 175 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms