RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SSX2Q16385 188 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 CDNFQ49AH0 187 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 OLFML2AQ68BL7 652 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 OR1L1Q8NH94 360 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 HDHD3Q9BSH5 251 aaPredicted RBP13.4□□□□□ -0.26
CXCL1-201ENST00000395761 CHIAQ9BZP6 476 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
CXCL1-201ENST00000395761 EXTL2Q9UBQ6 330 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 KCNK7Q9Y2U2 307 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 TBL2Q9Y4P3 447 aaKnown RBP13.4□□□□□ -0.26
CXCL1-201ENST00000395761 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 IGHV3-43A0A0B4J1X8 118 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 A0A1W2PPE3 182 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 SERPINE3A8MV23 424 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 MFNGO00587 321 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 NAPSAO96009 420 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 HBZP02008 142 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 IGHV3-43DP0DP04 118 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 PTBP1P26599 531 aaKnown RBP eCLIP13.39□□□□□ -0.27
CXCL1-201ENST00000395761 LOXL3P58215 753 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 TMEM69Q5SWH9 247 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 C16orf87Q6PH81 154 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 PRR18Q8N4B5 295 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 OR10A7Q8NGE5 316 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 OR9G1Q8NH87 305 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 C15orf40Q8WUR7 153 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 MALSU1Q96EH3 234 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 SSX3Q99909 188 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 DPAGT1Q9H3H5 408 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 ZMAT3Q9HA38 289 aaKnown RBP13.39□□□□□ -0.27
CXCL1-201ENST00000395761 TAF9BQ9HBM6 251 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 PSG11Q9UQ72 335 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 HILPDAQ9Y5L2 63 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 POMT1Q9Y6A1 747 aa13.39□□□□□ -0.27
CXCL1-201ENST00000395761 POM121CA8CG34 1229 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 J3QR06 171 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 F2RL2O00254 374 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 SDCBPO00560 298 aaPredicted RBP13.38□□□□□ -0.27
CXCL1-201ENST00000395761 TOR1AO14656 332 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 HTR1DP28221 377 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 GNG10P50151 68 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 RAB13P51153 203 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 PRRX1P54821 245 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 TAS2R20P59543 309 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 MINOS1Q5TGZ0 78 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 ZNF596Q8TC21 504 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 AUNIPQ9H7T9 357 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 CHMP1AQ9HD42 196 aaPredicted RBP13.38□□□□□ -0.27
CXCL1-201ENST00000395761 MINOS1-NBL1R4GNA1 71 aa13.38□□□□□ -0.27
CXCL1-201ENST00000395761 FABP12A6NFH5 140 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 LY6LH3BQJ8 138 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 BUB1B-PAK6H3BSN5 160 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 H3BUX3 64 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 SPINT2O43291 252 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 GNB3P16520 340 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 LRRC75BQ2VPJ9 315 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 HLA-DRB5Q30154 266 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 HACD4Q5VWC8 232 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 PYHIN1Q6K0P9 492 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 ZNF880Q6PDB4 577 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 PIFOQ8TCI5 191 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 ABHD1Q96SE0 405 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 RIMS4Q9H426 269 aaPredicted RBP13.37□□□□□ -0.27
CXCL1-201ENST00000395761 GFOD1Q9NXC2 390 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 KCNIP1Q9NZI2 227 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 DPM3Q9P2X0 92 aa13.37□□□□□ -0.27
CXCL1-201ENST00000395761 FAM181BA6NEQ2 426 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 CTDSPLO15194 276 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 ACTG1P63261 375 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 PITPNAQ00169 270 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 ZNF45Q02386 682 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 LY6EQ16553 131 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 SPANXN2Q5MJ10 180 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 IZUMO1Q8IYV9 350 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 OR52L2PQ8NGH6 319 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 OR10V1Q8NGI7 309 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 CMSS1Q9BQ75 279 aaKnown RBP13.36□□□□□ -0.27
CXCL1-201ENST00000395761 MMP28Q9H239 520 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 VPREB3Q9UKI3 123 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 MRPS7Q9Y2R9 242 aaKnown RBP13.36□□□□□ -0.27
CXCL1-201ENST00000395761 V9GYH0 126 aa13.36□□□□□ -0.27
CXCL1-201ENST00000395761 TRBV6-6A0A0A6YYG2 114 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 LEUTXA8MZ59 168 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 SULT1C2O00338 296 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 GPR137BO60478 399 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 MRPS10P82664 201 aaKnown RBP13.35□□□□□ -0.27
CXCL1-201ENST00000395761 LSAMPQ13449 338 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 HMGN3Q15651 99 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 AANATQ16613 207 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms