RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ZPBPQ9BS86 351 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 MAP1LC3BQ9GZQ8 125 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 SRD5A3Q9H8P0 318 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 SLC39A9Q9NUM3 307 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 CACNG5Q9UF02 275 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 POLDIP2Q9Y2S7 368 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TNFSF12O43508 249 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TRGC1P0CF51 173 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM241Q24JQ0 296 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF468Q5VIY5 522 aaPredicted RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 NCR3LG1Q68D85 454 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 FIP1L1Q6UN15 594 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 TCTEX1D1Q8N7M0 179 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 CA5BP1Q8WTZ4 195 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 APH1AQ96BI3 265 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 S100PBPQ96BU1 408 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 RTL8AQ9BWD3 113 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 PRRG4Q9BZD6 226 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 WDR61Q9GZS3 305 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 DLL3Q9NYJ7 618 aa8.56□□□□□ -1.04
UBE2D3-208ENST00000394803 MUC3AQ02505 3323 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 KIAA1324LA8MWY0 1029 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 HSPB6O14558 160 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 OTX2P32243 289 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 DCAF12Q5T6F0 453 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 LCN15Q6UWW0 184 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 PPP1R32Q7Z5V6 425 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 CENPVQ7Z7K6 275 aaPredicted RBP8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 ANAPC16Q96DE5 110 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 BCL2L14Q9BZR8 327 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF665Q9H7R5 613 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 SIT1Q9Y3P8 196 aa8.55□□□□□ -1.04
UBE2D3-208ENST00000394803 A0A0G2JMM0 328 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 A0A1W2PPB8 328 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 A0A1W2PRS3 328 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 IFITM10A6NMD0 228 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 KIR3DP1A8MWS1 328 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 H3BP45 60 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 DVL1O14640 695 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF737O75373 536 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 NXPH3O95157 252 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 HLA-HP01893 362 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 RFPL3SP0C7P2 107 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 SPNS3Q6ZMD2 512 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 MCEMP1Q8IX19 187 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 TMEM183AQ8IXX5 376 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 TAF15Q92804 592 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 LHX4Q969G2 390 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CIB3Q96Q77 187 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CDH20Q9HBT6 801 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 PRDM6Q9NQX0 595 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 OR14J1Q9UGF5 321 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 LAMP3Q9UQV4 416 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 RFNGQ9Y644 331 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 ARID1AO14497 2285 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 SHANK1Q9Y566 2161 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 TRAV24A0A0B4J272 114 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 HS3ST1O14792 307 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 SYNGR1O43759 233 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 KBTBD11O94819 623 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CFIP05156 583 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CCL4P13236 92 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 MEF2BQ02080 365 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CATR1Q13166 79 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 MRPL49Q13405 166 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 BATF2Q8N1L9 274 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 IL1F10Q8WWZ1 152 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 FRZBQ92765 325 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 RDH5Q92781 318 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 ZNF845Q96IR2 970 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 POM121L2Q96KW2 1035 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 KCNIP1Q9NZI2 227 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 KCNS2Q9ULS6 477 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CACNA1EQ15878 2313 aa8.54□□□□□ -1.04
UBE2D3-208ENST00000394803 CABIN1Q9Y6J0 2220 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 A0A0G2JRQ6 117 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 PPP5D1E7EU14 171 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 C17orf112F2Z3M2 114 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 VENTXO95231 258 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 SOD3P08294 240 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 FABP4P15090 132 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 FGF7P21781 194 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 FAM3BP58499 235 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 ACOT6Q3I5F7 207 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-208ENST00000394803 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms