RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 HAPLN4Q86UW8 402 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 OR10J5Q8NHC4 309 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 RAB39BQ96DA2 213 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 OR2W1Q9Y3N9 320 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 SMG1Q96Q15 3661 aaKnown RBP11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 CACNA1DQ01668 2161 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A10PA6NDY2 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A18PA6NE21 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A16PA6NEW6 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A20PA6NIJ5 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A8PA6NJQ4 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A7PA6NKC0 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 ANKRD30BLA7E2S9 258 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A22PA8MWA6 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A12PA8MX19 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A5PA8MXJ8 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A23PA8MXZ1 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 H0Y980 276 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 H3BQ15 152 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 SRP19P09132 144 aaKnown RBP11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A15PP0C7V4 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 METTL15P1P0C7V9 234 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A13PP0C7W8 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A14PP0C7W9 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 FAM90A24PP0C7X0 464 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 LINC00205P59089 165 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 Q6P435 159 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 CMTM1Q8IZ96 169 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 OR51I2Q9H344 312 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 RNF150Q9ULK6 438 aa11.41□□□□□ -0.58
GTF2F1-201ENST00000394456 KIR2DS1A0A191URI9 304 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 DEGS1O15121 323 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 OR8U8P0C7N1 319 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 KIR2DS4P43632 304 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 RAB5CP51148 216 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 SRPXP78539 464 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 HLA-DRB3P79483 266 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 PLP2Q04941 152 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 KIR2DS1Q14954 304 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 SAXO1Q8IYX7 474 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 PRSS33Q8NF86 280 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 SPIN2AQ99865 258 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 PBDC1Q9BVG4 233 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 OR2J1Q9GZK6 312 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 KCNS2Q9ULS6 477 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 CDIPTO14735 213 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 WDR1O75083 606 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 S100A6P06703 90 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 APLNRP35414 380 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 HMGN3Q15651 99 aa11.4□□□□□ -0.58
GTF2F1-201ENST00000394456 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 WNT9BO14905 357 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 OR2C1O95371 312 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 OR2H2O95918 312 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 SERPINE2P07093 398 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 CXCL1P09341 107 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 GNG3P63215 75 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 SP5Q6BEB4 398 aaPredicted RBP11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 OR1J1Q8NGS3 322 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 YPEL4Q96NS1 127 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 ATPIF1Q9UII2 106 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 GRPP07492 148 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 IDH3GP51553 393 aaPredicted RBP11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 FBXW9Q5XUX1 488 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 LCN15Q6UWW0 184 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 ZNF826PQ6ZT77 177 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 OR10V1Q8NGI7 309 aa11.39□□□□□ -0.59
GTF2F1-201ENST00000394456 LYZL6O75951 148 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 PAX6P26367 422 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 ARR3P36575 388 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 AKR1C8PQ5T2L2 129 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 SCCPDHQ8NBX0 429 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 RBMXL1Q96E39 390 aaKnown RBP11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 ATP5SQ99766 215 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 RBM7Q9Y580 266 aaKnown RBP11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 CHD3Q12873 2000 aaKnown RBP11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 LINC00587B1AMM8 73 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 UBE2CO00762 179 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 HSPA12AO43301 675 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 YIF1AO95070 293 aa11.38□□□□□ -0.59
GTF2F1-201ENST00000394456 IFNA4P05014 189 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms