RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PPIFP30405 207 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 RPS11P62280 158 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 LSAMPQ13449 338 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 NKAPLQ5M9Q1 402 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 LY6G6FQ5SQ64 297 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 ETAA1Q9NY74 926 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 ZNF107Q9UII5 783 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 EXOSC1Q9Y3B2 195 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
SNRPA1-202ENST00000394082 MYL12AP19105 171 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 MED21Q13503 144 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 SMN1Q16637 294 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 MORN2Q502X0 79 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 RAB12Q6IQ22 244 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 UBALD1Q8TB05 177 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 S100A14Q9HCY8 104 aa13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF256Q9Y2P7 627 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 MRPS28Q9Y2Q9 187 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-202ENST00000394082 TRBV5-7A0A0A0MS05 114 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 LALBAP00709 142 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 IGLV1-40P01703 118 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 HLA-DRB1P01911 266 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 OR8U8P0C7N1 319 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 ECI1P42126 302 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 HTD2P86397 168 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 KIAA0141Q14154 515 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 GLIPR1L1Q6UWM5 242 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 LYPD6Q86Y78 171 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF485Q8NCK3 441 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 OR4K15Q8NH41 348 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 PGLYRP3Q96LB9 341 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 SMPD3Q9NY59 655 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 PEX16Q9Y5Y5 336 aa13.63□□□□□ -0.23
SNRPA1-202ENST00000394082 TRAV8-7A0A075B6U6 113 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 MAGEA13PA6NCF6 341 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 C3orf84H3BNL1 204 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 I3L521 148 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 RCC1P18754 421 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 FUT3P21217 361 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 MMDQ15546 238 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF260Q3ZCT1 412 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 TMEM65Q6PI78 240 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF491Q8N8L2 437 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 OR13C5Q8NGS8 318 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 OR1L1Q8NH94 360 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 MUL1Q969V5 352 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 ORAI1Q96D31 301 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 PRR25Q96S07 402 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 TAF9BQ9HBM6 251 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 OR2S2Q9NQN1 319 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 GHRLQ9UBU3 117 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 VSIG4Q9Y279 399 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
SNRPA1-202ENST00000394082 YPEL1O60688 119 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 BAG2O95816 211 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 CD1AP06126 327 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 TAS2R43P59537 309 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF616Q08AN1 781 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 AWAT2Q6E213 333 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 JAGN1Q8N5M9 183 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 NKAIN3Q8N8D7 197 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 NPBQ8NG41 125 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 OR10V1Q8NGI7 309 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 THRSPQ92748 146 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 Q96M66 194 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 YPEL2Q96QA6 119 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 UQCC2Q9BRT2 126 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 OR51J1Q9H342 316 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 KCNIP1Q9NZI2 227 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 CLEC2DQ9UHP7 191 aa13.61□□□□□ -0.23
SNRPA1-202ENST00000394082 MGMTP16455 207 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 ACTBP60709 375 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 ADARB1P78563 741 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 DOC2BQ14184 412 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 SIGIRRQ6IA17 410 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF833PQ6ZTB9 187 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 ZNF429Q86V71 674 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 ODF3L1Q8IXM7 274 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 PRR18Q8N4B5 295 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 OR1N2Q8NGR9 330 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 SELENOIQ9C0D9 397 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 KLK15Q9H2R5 256 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 SMAD5-AS1Q9Y6J3 95 aa13.6□□□□□ -0.23
SNRPA1-202ENST00000394082 IGHV7-81A0A0B4J1V7 117 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 NBR2O15453 112 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 PDCD6O75340 191 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 RGS11O94810 467 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 NDUFA3O95167 84 aa13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 SLC2A2P11168 524 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-202ENST00000394082 CAPGP40121 348 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms