RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
CHMP3-202ENST00000393773 RITA1Q96K30 269 aa11.86□□□□□ -0.51
CHMP3-202ENST00000393773 TOLLIPQ9H0E2 274 aa11.86□□□□□ -0.51
CHMP3-202ENST00000393773 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
CHMP3-202ENST00000393773 FBXO7Q9Y3I1 522 aa11.86□□□□□ -0.51
CHMP3-202ENST00000393773 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 A0A087WW49 117 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 LINC01619G3V211 115 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 NBR2O15453 112 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 HBZP02008 142 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 CSTBP04080 98 aaKnown RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ZNF93P35789 620 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 SYT6Q5T7P8 510 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 XAF1Q6GPH4 301 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ODF3L1Q8IXM7 274 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 OR6Q1Q8NGQ2 317 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ANKRD60Q9BZ19 345 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 TMEM138Q9NPI0 162 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 ING4Q9UNL4 249 aa11.85□□□□□ -0.51
CHMP3-202ENST00000393773 EI24O14681 340 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 SPINT2O43291 252 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 NDUFA3O95167 84 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 OR8U9P0C7N5 309 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-202ENST00000393773 ADARB1P78563 741 aaKnown RBP11.84□□□□□ -0.51
CHMP3-202ENST00000393773 GNMTQ14749 295 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 SRSF7Q16629 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP3-202ENST00000393773 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 C6orf183Q5T699 404 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 OR4K15Q8NH41 348 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 TMEM106AQ96A25 262 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-202ENST00000393773 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 RAB9BQ9NP90 201 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 CHCHD3Q9NX63 227 aaKnown RBP11.84□□□□□ -0.51
CHMP3-202ENST00000393773 TNCP24821 2201 aa11.84□□□□□ -0.51
CHMP3-202ENST00000393773 SNTNA6NMZ2 147 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 LDLRAD4O15165 306 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF780AO75290 641 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-202ENST00000393773 CD2P06729 351 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 IGHV4-30-4P0DP06 118 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-202ENST00000393773 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 SLC22A6Q4U2R8 563 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 C1orf146Q5VVC0 180 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 STEAP3Q658P3 488 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 HAPLN4Q86UW8 402 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 LYPD6Q86Y78 171 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 Q8N1Y9 231 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 NPBQ8NG41 125 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 GPR148Q8TDV2 347 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 CASTOR1Q8WTX7 329 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 ORAI1Q96D31 301 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 SPACA1Q9HBV2 294 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 PAK1IP1Q9NWT1 392 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-202ENST00000393773 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
CHMP3-202ENST00000393773 MRPS28Q9Y2Q9 187 aaKnown RBP11.83□□□□□ -0.52
CHMP3-202ENST00000393773 A0A1W2PN81 502 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 A8MZ25 164 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 SC5DO75845 299 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 FADS2O95864 444 aaKnown RBP11.82□□□□□ -0.52
CHMP3-202ENST00000393773 LIMS3P0CW19 117 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 LIMS4P0CW20 117 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 GTF2F2P13984 249 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 RCC1P18754 421 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-202ENST00000393773 BDKRB2P30411 391 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 CHRNA7P36544 502 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 VEGFCP49767 419 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 PPP3R1P63098 170 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 PITPNAQ00169 270 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 RAB40BQ12829 278 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-202ENST00000393773 MORN2Q502X0 79 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 TRAT1Q6PIZ9 186 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF184Q99676 751 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF251Q9BRH9 671 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 CST11Q9H112 138 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 ETAA1Q9NY74 926 aa11.82□□□□□ -0.52
CHMP3-202ENST00000393773 FOXA2Q9Y261 457 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-202ENST00000393773 IGFBP3P17936 291 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-202ENST00000393773 RIPK1Q13546 671 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 RAB12Q6IQ22 244 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 ZNF833PQ6ZTB9 187 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 C5orf24Q7Z6I8 188 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 S100A13Q99584 98 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 GHITMQ9H3K2 345 aa11.81□□□□□ -0.52
CHMP3-202ENST00000393773 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms