RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 EDDM3AQ14507 147 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 C3orf36Q3SXR2 165 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 LINC00596Q86U02 117 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 PPP1R1CQ8WVI7 109 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 GCM1Q9NP62 436 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 SHISA9B4DS77 424 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 E7EQL1 145 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 SNAPINO95295 136 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 OR3A1P47881 315 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 TAS2R31P59538 309 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 RBM39Q14498 530 aaKnown RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 C11orf87Q6NUJ2 197 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 RFESDQ8TAC1 157 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 CRYM-AS1A6NIL9 109 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 SPP1P10451 314 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 HLA-GP17693 338 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 PRDX2P32119 198 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 GLP1RP43220 463 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 HERV-K104P61576 105 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 SPIN3Q5JUX0 258 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 LPCAT3Q6P1A2 487 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 GAPTQ8N292 157 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 ERRFI1Q9UJM3 462 aaPredicted RBP12.53□□□□□ -0.4
MKS1-202ENST00000393119 ABCA4P78363 2273 aa12.53□□□□□ -0.4
MKS1-202ENST00000393119 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.52□□□□□ -0.4
MKS1-202ENST00000393119 HLA-DRB3P79483 266 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 LTC4SQ16873 150 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 ABCA11PQ4W5N1 156 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 UTF1Q5T230 341 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 RBMXL1Q96E39 390 aaKnown RBP12.52□□□□□ -0.4
MKS1-202ENST00000393119 METTL8Q9H825 291 aaKnown RBP12.52□□□□□ -0.4
MKS1-202ENST00000393119 GSKIPQ9P0R6 139 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 WIPI2Q9Y4P8 454 aa12.52□□□□□ -0.4
MKS1-202ENST00000393119 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 SRRM5B3KS81 715 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.41
MKS1-202ENST00000393119 IGHV3-7P01780 117 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 TK1P04183 234 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 FOLR2P14207 255 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 SSTR5P35346 364 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 GNMTQ14749 295 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 FOXRED2Q8IWF2 684 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 NUP37Q8NFH4 326 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 POM121Q96HA1 1249 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
MKS1-202ENST00000393119 ASH1LQ9NR48 2969 aaKnown RBP12.52□□□□□ -0.41
MKS1-202ENST00000393119 HIVEP3Q5T1R4 2406 aa12.52□□□□□ -0.41
MKS1-202ENST00000393119 IFNA2P01563 188 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 CRYBA1P05813 215 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 KCNJ3P48549 501 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
MKS1-202ENST00000393119 Q6ZS49 121 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 LYZL2Q7Z4W2 148 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 OR52L2PQ8NGH6 319 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SCGB3A2Q96PL1 93 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SPTBN1Q01082 2364 aaKnown RBP12.51□□□□□ -0.41
MKS1-202ENST00000393119 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 C12orf77C9JDV5 145 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 H0YIZ8 118 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 LMO1P25800 156 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 CHRNB4P30926 498 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 ASCL1P50553 236 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SMIM21Q3B7S5 101 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 FAM209BQ5JX69 171 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 MEX3BQ6ZN04 569 aaKnown RBP12.51□□□□□ -0.41
MKS1-202ENST00000393119 RSRP1Q9BUV0 290 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 ZFP57Q9NU63 452 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 RNF150Q9ULK6 438 aa12.51□□□□□ -0.41
MKS1-202ENST00000393119 TRBV6-7A0A0A0MS04 114 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 KIR2DS1A0A191URI9 304 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 PHF1O43189 567 aaPredicted RBP12.5□□□□□ -0.41
MKS1-202ENST00000393119 TUSC2O75896 110 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 LHBP01229 141 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 PAX6P26367 422 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 KIR2DS4P43632 304 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 SELENOVP59797 346 aa12.5□□□□□ -0.41
MKS1-202ENST00000393119 RPS23P62266 143 aaKnown RBP12.5□□□□□ -0.41
MKS1-202ENST00000393119 KIR2DS1Q14954 304 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms