RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TIMM23BQ5SRD1 257 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 COQ2Q96H96 371 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 TREM1Q9NP99 234 aa21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 HEATR1Q9H583 2144 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-203ENST00000392811 C12orf77C9JDV5 145 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 M0R1B8 84 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 ATG12O94817 140 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 TMEM50AO95807 157 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 IGKV1-39P01597 117 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 IGKV1D-39P04432 117 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 TIMP3P35625 211 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 SWI5Q1ZZU3 235 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 LRP11Q86VZ4 500 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 TMEM252Q8N6L7 170 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 METRNQ9UJH8 293 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 PITX3O75364 302 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 SMIM21Q3B7S5 101 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 OR2Z1Q8NG97 314 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 SH3BGRL3Q9H299 93 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 FAM96BQ9Y3D0 163 aa21.51■■□□□ 1.03
SMARCD3-203ENST00000392811 MUC6Q6W4X9 2439 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 PIGBOS1A0A0B4J2F0 54 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 F2RL1P55085 397 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 DRAM1Q8N682 238 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 HSD17B11Q8NBQ5 300 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 LRRC29Q8WV35 223 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 SLC25A31Q9H0C2 315 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 DUSP13Q9UII6 198 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 BOD1L1Q8NFC6 3051 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 GVINP1Q7Z2Y8 2422 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 CEP250Q9BV73 2442 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 KIAA2026Q5HYC2 2103 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 A0A1B0GU03 582 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 CHST1O43916 411 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 MMP9P14780 707 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 MUC1P15941 1255 aaPredicted RBP21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 OMGP23515 440 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 COL10A1Q03692 680 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 CLINT1Q14677 625 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 ODF3L1Q8IXM7 274 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 GALMQ96C23 342 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 TSNAXQ99598 290 aaKnown RBP21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 UQCC1Q9NVA1 299 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 RNF115Q9Y4L5 304 aa21.5■■□□□ 1.03
SMARCD3-203ENST00000392811 OOEPA6NGQ2 149 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 TSPAN4O14817 238 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 NUPL2O15504 423 aaKnown RBP21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 DANCRP0C864 163 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 SLC25A6P12236 298 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 ZNF16P17020 682 aaPredicted RBP21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 MZT1Q08AG7 82 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 ZNF273Q14593 569 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 IZUMO4Q1ZYL8 232 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 RNASE11Q8TAA1 199 aaKnown RBP21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 LRFN3Q9BTN0 628 aa21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 LIN7CQ9NUP9 197 aaKnown RBP21.49■■□□□ 1.03
SMARCD3-203ENST00000392811 IFNL4K9M1U5 179 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 WRBO00258 174 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 AGPAT2O15120 278 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 GABRA2P47869 451 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 ZNF585BQ52M93 769 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 C10orf91Q5T1B1 145 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 LYPD6BQ8NI32 183 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 NKX6-2Q9C056 277 aaPredicted RBP21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 F8W036 122 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 HBZP02008 142 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 IL2RGP31785 369 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 KRTCAP3Q53RY4 240 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 Q6ZRM9 215 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 OR52L2PQ8NGH6 319 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 FAM57AQ8TBR7 257 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 SFXN3Q9BWM7 321 aa21.48■■□□□ 1.03
SMARCD3-203ENST00000392811 CEACAM8P31997 349 aaPredicted RBP21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 PAX9P55771 341 aa21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 GUCA2BQ16661 112 aa21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 FAM53AQ6NSI3 398 aaPredicted RBP21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 MRGPRDQ8TDS7 321 aa21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 TMEM171Q8WVE6 324 aa21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 LSM10Q969L4 123 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-203ENST00000392811 LOC105371267A0A1B0GV96 52 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 KIAA1324LA8MWY0 1029 aaPredicted RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 IGKV1-5P01602 117 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CRYAAP02489 173 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CD200P41217 278 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 GLIPR1P48060 266 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 TAGLNQ01995 201 aaKnown RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 KRBOX4Q5JUW0 171 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CD177Q8N6Q3 437 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 MUCL1Q96DR8 90 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CACFD1Q9UGQ2 172 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CARHSP1Q9Y2V2 147 aaKnown RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CHD3Q12873 2000 aaKnown RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 MKRN2OSH3BPM6 223 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 DNASE2O00115 360 aaPredicted RBP21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 CST7O76096 145 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 EGR1P18146 543 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 ZNF266Q14584 549 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 FAM180AQ6UWF9 173 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 ASCL5Q7RTU5 278 aa21.46■■□□□ 1.03
SMARCD3-203ENST00000392811 PUSL1Q8N0Z8 303 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms