RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 H0YL77 283 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 CTAG2O75638 210 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 GAPDHP04406 335 aaKnown RBP16.28■□□□□ 0.2
CCDC50-202ENST00000392456 MMP16P51512 607 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 MYPOPQ86VE0 399 aaPredicted RBP16.28■□□□□ 0.2
CCDC50-202ENST00000392456 H1FOOQ8IZA3 346 aaPredicted RBP16.28■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM56Q96MV1 263 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 FOXB1Q99853 325 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 ZNF71Q9NQZ8 489 aaPredicted RBP16.28■□□□□ 0.2
CCDC50-202ENST00000392456 TMEM56-RWDD3S4R434 201 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 IGHV2-70DA0A0C4DH43 119 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 DBHP09172 617 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 FUT3P21217 361 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 ADGRE4PQ86SQ3 457 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 STPG4Q8N801 248 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 RAB22AQ9UL26 194 aa16.28■□□□□ 0.2
CCDC50-202ENST00000392456 TRBV24-1A0A075B6N3 115 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 P2RY10O00398 339 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 SCAND1P57086 179 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 RNPS1Q15287 305 aaKnown RBP16.27■□□□□ 0.2
CCDC50-202ENST00000392456 SLC9A3R2Q15599 337 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 KLHL24Q6TFL4 600 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 MCEMP1Q8IX19 187 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 OR4C5Q8NGB2 326 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 TVP23CQ96ET8 276 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 PRSS50Q9UI38 385 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 RNF115Q9Y4L5 304 aa16.27■□□□□ 0.2
CCDC50-202ENST00000392456 TPRP12270 2363 aaKnown RBP16.27■□□□□ 0.2
CCDC50-202ENST00000392456 CNOT4O95628 575 aaKnown RBP16.27■□□□□ 0.19
CCDC50-202ENST00000392456 TTRP02766 147 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 OR5G3P0C626 314 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 MDKP21741 143 aaPredicted RBP16.27■□□□□ 0.19
CCDC50-202ENST00000392456 SLC22A24Q8N4F4 322 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 OR51A2Q8NGJ7 313 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 ASB5Q8WWX0 329 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 TRIB1Q96RU8 372 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 TBX15Q96SF7 602 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 SLC6A7Q99884 636 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 RARRES2Q99969 163 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 PPIAL4AQ9Y536 164 aa16.27■□□□□ 0.19
CCDC50-202ENST00000392456 JTBO76095 146 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 TMEM33P57088 247 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF121P58317 390 aaPredicted RBP16.26■□□□□ 0.19
CCDC50-202ENST00000392456 HIST1H3AP68431 136 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 GJC3Q8NFK1 279 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 ACY3Q96HD9 319 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 PBOV1Q9GZY1 135 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 CLCF1Q9UBD9 225 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 HSPB7Q9UBY9 170 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 A0A096LPE4 126 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 TRBV5-7A0A0A0MS05 114 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 A0A1W2PPZ6 126 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 KNG1P01042 644 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 CAMLGP49069 296 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 EFNB2P52799 333 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 FBXW12Q6X9E4 464 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 FAM216AQ8WUB2 273 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 PRRT1Q99946 306 aa16.26■□□□□ 0.19
CCDC50-202ENST00000392456 LOC107986453A0A1B0GWG9 222 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 F5H5K5 113 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 IFNL4K9M1U5 179 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ARF1P84077 181 aaKnown RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 P2RY6Q15077 328 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF429Q86V71 674 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 TSEN15Q8WW01 171 aaKnown RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 APH1AQ96BI3 265 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 RPUSD4Q96CM3 377 aaKnown RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 CST9LQ9H4G1 147 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 PLEK2Q9NYT0 353 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 DKK4Q9UBT3 224 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 RELNP78509 3460 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 NBEAQ8NFP9 2946 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF705FA8MVS1 300 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF705DP0CH99 300 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF705BP0CI00 300 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF32P17041 273 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 RANP62826 216 aaKnown RBP16.25■□□□□ 0.19
CCDC50-202ENST00000392456 FBLN7Q53RD9 439 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 LDLRAD2Q5SZI1 272 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 LFNGQ8NES3 379 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 RBKSQ9H477 322 aa16.25■□□□□ 0.19
CCDC50-202ENST00000392456 LOC100289279A0A1B0GTE1 492 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF503-AS2A6NEH8 195 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 MAS1P04201 325 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 FAM87AP0C7U9 286 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 FPR2P25090 351 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 ARR3P36575 388 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 FHITP49789 147 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 ZDHHC22Q8N966 263 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 MRGPRFQ96AM1 343 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 CLEC5AQ9NY25 188 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 GOSR1O95249 250 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 TAF9Q16594 264 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 OR8B12Q8NGG6 310 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 OR51E1Q8TCB6 317 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 LINC00470Q9BZP3 86 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 SRD5A3Q9H8P0 318 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 SLC2A9Q9NRM0 540 aa16.24■□□□□ 0.19
CCDC50-202ENST00000392456 COX11Q9Y6N1 276 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms