RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ZNF627Q7L945 461 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 TRAPPC6BQ86SZ2 158 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 FJX1Q86VR8 437 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 CATSPERDQ86XM0 798 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF573Q86YE8 665 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 TGIF2LXQ8IUE1 241 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 UEVLDQ8IX04 471 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 C11orf44Q8N8P7 122 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 OR6K6Q8NGW6 343 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 OR8S1Q8NH09 359 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 OR8U1Q8NH10 309 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 OR4K13Q8NH42 304 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 ABHD3Q8WU67 409 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM18Q96B42 140 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 FGGYQ96C11 551 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 CPNE2Q96FN4 548 aaPredicted RBP6.39□□□□□ -1.39
TRBV28-201ENST00000390400 OXGR1Q96P68 337 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 PYGO2Q9BRQ0 406 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 SUCNR1Q9BXA5 334 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 SLC25A31Q9H0C2 315 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 WNT5BQ9H1J7 359 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 PLK3Q9H4B4 646 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 CHODLQ9H9P2 273 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 CDH20Q9HBT6 801 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 MSL2Q9HCI7 577 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 G6PC2Q9NQR9 355 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 KLHL13Q9P2N7 655 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 CLCF1Q9UBD9 225 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 FREM1Q5H8C1 2179 aa6.39□□□□□ -1.39
TRBV28-201ENST00000390400 TRGV8A0A0C4DH27 118 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 LOC102725191A0A1B0GVB3 256 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 A0A1W2PN81 502 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 DUXBA0A1W2PPF3 345 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SERPINE3A8MV23 424 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 MS4A18H0YCH9 400 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 CCSO14618 274 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 RAMP1O60894 148 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 MMP23AO75900 390 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 C1QL1O75973 258 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 YIF1AO95070 293 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 IGHMP01871 453 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 TMEM225BP0DP42 221 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF43P17038 809 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 FCGR2CP31995 323 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 CHRNA7P36544 502 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 RBMXP38159 391 aaKnown RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 PSMB10P40306 273 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 ALDH3B1P43353 468 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 PCP4P48539 62 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 CSNK1A1P48729 337 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 EFNB2P52799 333 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 FAM3BP58499 235 aaPredicted RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 UBE2KP61086 200 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 TLE4Q04727 773 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 BAXQ07812 192 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 TAF9Q16594 264 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 MS4A18Q3C1V0 323 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 CHRFAM7AQ494W8 412 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 ALG10Q5BKT4 473 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 BEX5Q5H9J7 111 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SP5Q6BEB4 398 aaPredicted RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 OR2T2Q6IF00 324 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 PLXDC2Q6UX71 529 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 DOLPP1Q86YN1 238 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SGPP2Q8IWX5 399 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 ZNF101Q8IZC7 436 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 LRRC75AQ8NAA5 344 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 C9orf106Q8NAJ2 232 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 KCNG3Q8TAE7 436 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 MRGPRFQ96AM1 343 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 FAM210BQ96KR6 192 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 Q96M85 177 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 HIST1H2AAQ96QV6 131 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 HIST1H2BLQ99880 126 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 URM1Q9BTM9 101 aaKnown RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SF3B5Q9BWJ5 86 aaKnown RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SSBP3Q9BWW4 388 aaPredicted RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 GLRX2Q9NS18 164 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 B3GAT1Q9P2W7 334 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 SH3BGRL2Q9UJC5 107 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 IKZF2Q9UKS7 526 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 C14orf166Q9Y224 244 aaKnown RBP6.38□□□□□ -1.39
TRBV28-201ENST00000390400 OSGIN2Q9Y236 505 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 FAM215AQ9Y5M1 114 aa6.38□□□□□ -1.39
TRBV28-201ENST00000390400 IGKV3D-15A0A087WSY6 115 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 C13orf42A0A1B0GVH6 325 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 A0A1W2PPE2 198 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 A0A1W2PPQ1 181 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 MSGN1A6NI15 193 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 A6NIZ1 184 aa6.37□□□□□ -1.39
TRBV28-201ENST00000390400 MBD3L5A6NJ08 208 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms